| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is cysQ [H]
Identifier: 86607939
GI number: 86607939
Start: 452438
End: 453265
Strand: Reverse
Name: cysQ [H]
Synonym: CYB_0444
Alternate gene names: 86607939
Gene position: 453265-452438 (Counterclockwise)
Preceding gene: 86607940
Following gene: 86607936
Centisome position: 14.88
GC content: 62.8
Gene sequence:
>828_bases GTGCAGGCTCAAGATCTGGCCGCTCTCCTGCCTGAGGTGTGCCGCCTGGCAGAAGCAGCAGGGCAGGCCATCTTGCCCTT CTATCGGCAAAAATCGCTGCCGATCCAACTCAAAGCAGATGCCTCCCCCCTAACTGAGGCGGATCTGGCTGCCCACCACC TGATCCTGCAGGGCCTGCAAGAGTTGACCCCAGGGATCCCCCTCCTCTCGGAAGAATCCAGCGATATCCCCTACGCCCAG CGGCAGGTGTGGCGGCACTTCTGGCTGGTGGATCCCTTGGATGGCACGCGCGAGTTTATCGAAGGCAGCGGCCAGTTCAC CGTCAACATTGCCCTTGTCGAGGTGGGGATCCCCATCCTGGGGGTCGTCCATGCCCCAGCTCTGGGCCTCACCTACGCGG CTGCGCAAAAGCTGGGGGCCTGCAAGAGGGAAAGGACTCCGTCCTGCGTTCACGAACAGCCCATCCGCACCTGCCCTTAC GCCCAAGAACCCCTACAAGTGGTGGCCAGCCGTTCCCACAGCAACCCGGAGACGGAGCAGTTCCTCGAGCGGCTGCGGCA GCGCTGTGGCTCTCTGGAAGTGAAGTCTGTGGGCAGTGCCCTAAAGCTTTGCCTTGTGGCCGAAGGATCTGCCCATCTCT ACCCTCGCTTCGGCCCCACCATGGAGTGGGATACTGCCGCTGCCCAGTGCATTGTGGAGCAGGCGGGGGGAAGGGTTACC GATCTGGTAGGGGATCCCTTGCGCTACAACAAGCCCGACCTGCACAACCCGCCCTTTGTAGCGGCTGCCGAAGGCATGGC CCAACTGTGGCAGAACCTGATCCCCTGA
Upstream 100 bases:
>100_bases GGCTTCTCTGTTGCACTACGGCCAGTTAACGATTGCCCAAATCAAAGCCGACTTGGCCGCCCACGGCATTCCGGTGCGTT TCTAGCTTGGGGAGGGATCC
Downstream 100 bases:
>100_bases GCGAAGCCCCGGCTACATGCCCATCTCTGTGGGGTTAAAGCCATCCGGGAACTTGGTGTACTCGTCGTAAAGGGCACCGC GGAAATGGGTGTTGGTGATG
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 275; Mature: 275
Protein sequence:
>275_residues MQAQDLAALLPEVCRLAEAAGQAILPFYRQKSLPIQLKADASPLTEADLAAHHLILQGLQELTPGIPLLSEESSDIPYAQ RQVWRHFWLVDPLDGTREFIEGSGQFTVNIALVEVGIPILGVVHAPALGLTYAAAQKLGACKRERTPSCVHEQPIRTCPY AQEPLQVVASRSHSNPETEQFLERLRQRCGSLEVKSVGSALKLCLVAEGSAHLYPRFGPTMEWDTAAAQCIVEQAGGRVT DLVGDPLRYNKPDLHNPPFVAAAEGMAQLWQNLIP
Sequences:
>Translated_275_residues MQAQDLAALLPEVCRLAEAAGQAILPFYRQKSLPIQLKADASPLTEADLAAHHLILQGLQELTPGIPLLSEESSDIPYAQ RQVWRHFWLVDPLDGTREFIEGSGQFTVNIALVEVGIPILGVVHAPALGLTYAAAQKLGACKRERTPSCVHEQPIRTCPY AQEPLQVVASRSHSNPETEQFLERLRQRCGSLEVKSVGSALKLCLVAEGSAHLYPRFGPTMEWDTAAAQCIVEQAGGRVT DLVGDPLRYNKPDLHNPPFVAAAEGMAQLWQNLIP >Mature_275_residues MQAQDLAALLPEVCRLAEAAGQAILPFYRQKSLPIQLKADASPLTEADLAAHHLILQGLQELTPGIPLLSEESSDIPYAQ RQVWRHFWLVDPLDGTREFIEGSGQFTVNIALVEVGIPILGVVHAPALGLTYAAAQKLGACKRERTPSCVHEQPIRTCPY AQEPLQVVASRSHSNPETEQFLERLRQRCGSLEVKSVGSALKLCLVAEGSAHLYPRFGPTMEWDTAAAQCIVEQAGGRVT DLVGDPLRYNKPDLHNPPFVAAAEGMAQLWQNLIP
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI5031789, Length=255, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=8e-13, Organism=Homo sapiens, GI221625487, Length=255, Percent_Identity=26.6666666666667, Blast_Score=71, Evalue=1e-12, Organism=Escherichia coli, GI1790659, Length=254, Percent_Identity=48.4251968503937, Blast_Score=200, Evalue=8e-53, Organism=Escherichia coli, GI1788882, Length=248, Percent_Identity=25.4032258064516, Blast_Score=69, Evalue=4e-13, Organism=Caenorhabditis elegans, GI71995897, Length=283, Percent_Identity=28.6219081272085, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI71995905, Length=283, Percent_Identity=28.6219081272085, Blast_Score=93, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17537869, Length=287, Percent_Identity=29.616724738676, Blast_Score=84, Evalue=1e-16, Organism=Drosophila melanogaster, GI24641722, Length=271, Percent_Identity=26.1992619926199, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI21357329, Length=243, Percent_Identity=24.6913580246914, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 30035; Mature: 30035
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQDLAALLPEVCRLAEAAGQAILPFYRQKSLPIQLKADASPLTEADLAAHHLILQGLQ CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH ELTPGIPLLSEESSDIPYAQRQVWRHFWLVDPLDGTREFIEGSGQFTVNIALVEVGIPIL HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEEEECCCHHH GVVHAPALGLTYAAAQKLGACKRERTPSCVHEQPIRTCPYAQEPLQVVASRSHSNPETEQ HHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHH FLERLRQRCGSLEVKSVGSALKLCLVAEGSAHLYPRFGPTMEWDTAAAQCIVEQAGGRVT HHHHHHHHHCCCCHHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEE DLVGDPLRYNKPDLHNPPFVAAAEGMAQLWQNLIP HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MQAQDLAALLPEVCRLAEAAGQAILPFYRQKSLPIQLKADASPLTEADLAAHHLILQGLQ CCHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHH ELTPGIPLLSEESSDIPYAQRQVWRHFWLVDPLDGTREFIEGSGQFTVNIALVEVGIPIL HHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEEEEEECCCHHH GVVHAPALGLTYAAAQKLGACKRERTPSCVHEQPIRTCPYAQEPLQVVASRSHSNPETEQ HHHHCCHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCCCHHHHHHHHHCCCCCCCHHH FLERLRQRCGSLEVKSVGSALKLCLVAEGSAHLYPRFGPTMEWDTAAAQCIVEQAGGRVT HHHHHHHHHCCCCHHHHHHHHHHHHEECCCCEECCCCCCCCCHHHHHHHHHHHHHCCEEE DLVGDPLRYNKPDLHNPPFVAAAEGMAQLWQNLIP HHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]