| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is yeaZ [C]
Identifier: 86607930
GI number: 86607930
Start: 445110
End: 445817
Strand: Direct
Name: yeaZ [C]
Synonym: CYB_0434
Alternate gene names: 86607930
Gene position: 445110-445817 (Clockwise)
Preceding gene: 86607927
Following gene: 86607931
Centisome position: 14.61
GC content: 63.56
Gene sequence:
>708_bases ATGTCGCTTGTCCGCTGGATTTTAGGGATCCACACCACCACGCCCGTTTTGGGCCTGGCCCTGCTGCCGTTGGAGCCAGG GTTGGGAGAAACCCGCAGTCAGAGCTGGTGGCTGGATCGGGAGATGGCAGCGCAGTTGCACCCCTGCTTGAAAGTCTTCT TGGCCGGTCAAGCTTGGTCGCAGATAGCTGGGATCGCTGTAGCTTTGGGGCCGGGCAGCTTTACGGGCAGCCGTTTGGGG GTGAGCGTGGCCCGTCTGCTGGGCCAGCAACTGGGCATTCCCGTGTTTGGCTACTCGGCTTTGGCCGTCCTCGCCCGCCA GGTGTGGCAGGAGCAGGGATCCCCGCCCCAGCCCTTGACGGTGGCGGTGCAGATGGACGCCAAACGAGGAGAGCGGTATG GCGGCGTGTATCGGGTGACAGAAGAGGGTGTCGCTGCAGAAGTGGCCGATCGGCTCTGGGAGGAAGAGGCTTGGCAGGCA ACTCTCCGACAGTGGCCGCAAGCTCTATCCGTGAATGCCGCCGATTTTGTGGATTCTGCACCTGTGGTGGCGTTGGCAGA ATTGGCCCGCGCCGATTTTCGGGCCGGATTGCGCCCTCAGTGGCAGGAGGTGTTGCCCCTCTACGGTCGCCAGCCCCCGA TTGATCTCAGAGGGCTGAATCGGACTCCGCCTCCCCAGCGCGAACGGAGTGCCCCATCGTCACGGTAA
Upstream 100 bases:
>100_bases ATGAGAACAAACTTCCCTGAGGAAGTGCGAAGATTGACAACCTAAACTTAAAACATCCGTTAAGTTTCGTCAACCACCTT TTTTGATCCTGAGAGAGGCC
Downstream 100 bases:
>100_bases TATTGGGAAGTCTAAGCAACGGATCCCTCTGCTGACATGATCTCAAGCAACGATTTGCGCCCTGGCGTCTCTGTAGAAAT TGACGGAGCTCCCTACAAGG
Product: glycoprotease family protein
Products: NA
Alternate protein names: Glycoprotease Family Protein; Glycoprotease Family
Number of amino acids: Translated: 235; Mature: 234
Protein sequence:
>235_residues MSLVRWILGIHTTTPVLGLALLPLEPGLGETRSQSWWLDREMAAQLHPCLKVFLAGQAWSQIAGIAVALGPGSFTGSRLG VSVARLLGQQLGIPVFGYSALAVLARQVWQEQGSPPQPLTVAVQMDAKRGERYGGVYRVTEEGVAAEVADRLWEEEAWQA TLRQWPQALSVNAADFVDSAPVVALAELARADFRAGLRPQWQEVLPLYGRQPPIDLRGLNRTPPPQRERSAPSSR
Sequences:
>Translated_235_residues MSLVRWILGIHTTTPVLGLALLPLEPGLGETRSQSWWLDREMAAQLHPCLKVFLAGQAWSQIAGIAVALGPGSFTGSRLG VSVARLLGQQLGIPVFGYSALAVLARQVWQEQGSPPQPLTVAVQMDAKRGERYGGVYRVTEEGVAAEVADRLWEEEAWQA TLRQWPQALSVNAADFVDSAPVVALAELARADFRAGLRPQWQEVLPLYGRQPPIDLRGLNRTPPPQRERSAPSSR >Mature_234_residues SLVRWILGIHTTTPVLGLALLPLEPGLGETRSQSWWLDREMAAQLHPCLKVFLAGQAWSQIAGIAVALGPGSFTGSRLGV SVARLLGQQLGIPVFGYSALAVLARQVWQEQGSPPQPLTVAVQMDAKRGERYGGVYRVTEEGVAAEVADRLWEEEAWQAT LRQWPQALSVNAADFVDSAPVVALAELARADFRAGLRPQWQEVLPLYGRQPPIDLRGLNRTPPPQRERSAPSSR
Specific function: Unknown
COG id: COG1214
COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25672; Mature: 25541
Theoretical pI: Translated: 8.48; Mature: 8.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLVRWILGIHTTTPVLGLALLPLEPGLGETRSQSWWLDREMAAQLHPCLKVFLAGQAWS CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH QIAGIAVALGPGSFTGSRLGVSVARLLGQQLGIPVFGYSALAVLARQVWQEQGSPPQPLT HHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEE VAVQMDAKRGERYGGVYRVTEEGVAAEVADRLWEEEAWQATLRQWPQALSVNAADFVDSA EEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC PVVALAELARADFRAGLRPQWQEVLPLYGRQPPIDLRGLNRTPPPQRERSAPSSR HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure SLVRWILGIHTTTPVLGLALLPLEPGLGETRSQSWWLDREMAAQLHPCLKVFLAGQAWS HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHH QIAGIAVALGPGSFTGSRLGVSVARLLGQQLGIPVFGYSALAVLARQVWQEQGSPPQPLT HHHCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCEE VAVQMDAKRGERYGGVYRVTEEGVAAEVADRLWEEEAWQATLRQWPQALSVNAADFVDSA EEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC PVVALAELARADFRAGLRPQWQEVLPLYGRQPPIDLRGLNRTPPPQRERSAPSSR HHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA