| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607905
Identifier: 86607905
GI number: 86607905
Start: 419605
End: 420060
Strand: Reverse
Name: 86607905
Synonym: CYB_0408
Alternate gene names: NA
Gene position: 420060-419605 (Counterclockwise)
Preceding gene: 86607906
Following gene: 86607904
Centisome position: 13.79
GC content: 59.65
Gene sequence:
>456_bases ATGACGGTTACCCCTCTTTCCCCCTCGACCAGCCCCATCTTGCAAGAGATCGTTCGCCAGATGCGGGCGGCGGATCCCTA CGGCACCTACCGCGCCTGGAGTGATGAGTTGCTGCTCAAGCCCTTTGTCGTCACCAAAGCCCAAAAACGCCAGATATCCC TCGAAGGGGAGGTGGATCCCGGGGTGCGGAGCCGCATTCTCATCTACTACCGCGCCATTGCCGCCCTGATCGAAAAGGAG ACGGGCCTCCTGGCTCAGGTGGTGCTGGATCTCAACAGCGAAGGCTTTGGTTGGGTGCTGGTCTTCTCAGGGCGGTTGTT GTTGGTGGTCAACACCCTGCGGGATGCCCATCGCTTTGGCTTTGACTCCCTCGAACAGCTCAGCGAAAAAGCCACTGCCC TTATCGACAAAGGGATCCAACTGGCCCGAACCTACCCTGAGGTGGGCCGACTGTAG
Upstream 100 bases:
>100_bases TGCACAACCCTCCCCCCTGGCTGCGCAAAGTGCTCTTGGCCGAGCGCGCCCGCAAAGCCGAAGCCCCAAATCCCTCTACT TCCCCTGCGGAGGTTTAGCC
Downstream 100 bases:
>100_bases CCGCTTGTCTCCGTCCCGGCAGCCATTTTTTCTTCTTTTTCTTCAGCAATTAGGAGTGCCTTGCCCATGTTGAATGAGAG TGACGTTGAGAATGTTGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: ORF3 [H]
Number of amino acids: Translated: 151; Mature: 150
Protein sequence:
>151_residues MTVTPLSPSTSPILQEIVRQMRAADPYGTYRAWSDELLLKPFVVTKAQKRQISLEGEVDPGVRSRILIYYRAIAALIEKE TGLLAQVVLDLNSEGFGWVLVFSGRLLLVVNTLRDAHRFGFDSLEQLSEKATALIDKGIQLARTYPEVGRL
Sequences:
>Translated_151_residues MTVTPLSPSTSPILQEIVRQMRAADPYGTYRAWSDELLLKPFVVTKAQKRQISLEGEVDPGVRSRILIYYRAIAALIEKE TGLLAQVVLDLNSEGFGWVLVFSGRLLLVVNTLRDAHRFGFDSLEQLSEKATALIDKGIQLARTYPEVGRL >Mature_150_residues TVTPLSPSTSPILQEIVRQMRAADPYGTYRAWSDELLLKPFVVTKAQKRQISLEGEVDPGVRSRILIYYRAIAALIEKET GLLAQVVLDLNSEGFGWVLVFSGRLLLVVNTLRDAHRFGFDSLEQLSEKATALIDKGIQLARTYPEVGRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0460 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004952 [H]
Pfam domain/function: PF03270 DUF269 [H]
EC number: NA
Molecular weight: Translated: 16888; Mature: 16757
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVTPLSPSTSPILQEIVRQMRAADPYGTYRAWSDELLLKPFVVTKAQKRQISLEGEVDP CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCC GVRSRILIYYRAIAALIEKETGLLAQVVLDLNSEGFGWVLVFSGRLLLVVNTLRDAHRFG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHCC FDSLEQLSEKATALIDKGIQLARTYPEVGRL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC >Mature Secondary Structure TVTPLSPSTSPILQEIVRQMRAADPYGTYRAWSDELLLKPFVVTKAQKRQISLEGEVDP CCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCC GVRSRILIYYRAIAALIEKETGLLAQVVLDLNSEGFGWVLVFSGRLLLVVNTLRDAHRFG CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCEEEEEECCCCEEHHHHHHHHHHCC FDSLEQLSEKATALIDKGIQLARTYPEVGRL HHHHHHHHHHHHHHHHHHHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7642138 [H]