Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607904

Identifier: 86607904

GI number: 86607904

Start: 419275

End: 419538

Strand: Reverse

Name: 86607904

Synonym: CYB_0407

Alternate gene names: NA

Gene position: 419538-419275 (Counterclockwise)

Preceding gene: 86607905

Following gene: 86607903

Centisome position: 13.77

GC content: 56.82

Gene sequence:

>264_bases
ATGTTGAATGAGAGTGACGTTGAGAATGTTGTGAACGGCCTGGATTTCGAGCCCTTTGAACACCTGTCTGCCGACCAGCT
CCGCACCGAGATCAAACGACTAAACAGCAAAGCAGGCCAACTGAAAATGGATCTGCACGATCTGGCCGAGGGGCTACCCG
ACGGGTTCGAGCGACTCCCCGACTTGGCAGCCCGCACCTATGCCCTGTTTGCCCGGCTGCACACCCTCAGACAACGCTTG
AAAACCCTGGAGACCTGCCGATGA

Upstream 100 bases:

>100_bases
GGCCCGAACCTACCCTGAGGTGGGCCGACTGTAGCCGCTTGTCTCCGTCCCGGCAGCCATTTTTTCTTCTTTTTCTTCAG
CAATTAGGAGTGCCTTGCCC

Downstream 100 bases:

>100_bases
GTTGGAACCACAACCGCCGTTGGAAAGACTTCCAAGCCCTAGTCAATGCCGAGGATTATTTCGCTTTTTTCGAGCTCCCC
TACGATCCGCGGGTGGTCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 87; Mature: 87

Protein sequence:

>87_residues
MLNESDVENVVNGLDFEPFEHLSADQLRTEIKRLNSKAGQLKMDLHDLAEGLPDGFERLPDLAARTYALFARLHTLRQRL
KTLETCR

Sequences:

>Translated_87_residues
MLNESDVENVVNGLDFEPFEHLSADQLRTEIKRLNSKAGQLKMDLHDLAEGLPDGFERLPDLAARTYALFARLHTLRQRL
KTLETCR
>Mature_87_residues
MLNESDVENVVNGLDFEPFEHLSADQLRTEIKRLNSKAGQLKMDLHDLAEGLPDGFERLPDLAARTYALFARLHTLRQRL
KTLETCR

Specific function: Unknown

COG id: COG5420

COG function: function code S; Uncharacterized conserved small protein containing a coiled-coil domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0437 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007774 [H]

Pfam domain/function: PF05082 DUF683 [H]

EC number: NA

Molecular weight: Translated: 9994; Mature: 9994

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNESDVENVVNGLDFEPFEHLSADQLRTEIKRLNSKAGQLKMDLHDLAEGLPDGFERLP
CCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DLAARTYALFARLHTLRQRLKTLETCR
HHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNESDVENVVNGLDFEPFEHLSADQLRTEIKRLNSKAGQLKMDLHDLAEGLPDGFERLP
CCCHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
DLAARTYALFARLHTLRQRLKTLETCR
HHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]