| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607883
Identifier: 86607883
GI number: 86607883
Start: 400775
End: 401392
Strand: Reverse
Name: 86607883
Synonym: CYB_0386
Alternate gene names: NA
Gene position: 401392-400775 (Counterclockwise)
Preceding gene: 86607884
Following gene: 86607882
Centisome position: 13.17
GC content: 47.73
Gene sequence:
>618_bases ATGAAATCAGAGATCTACACGATTGGTCACTCAAACCACGAGATTGATTTTTTCATAGACTTACTGCGCCAGTACAACAT CACCGGTATTGGCGACGTTCGCTCACGTCCATATAGCCGTTACGTCCCTCAATATTCACAAGAAAAGTTGAAAAGTGCTT TAGCGGCAGCAGGTATTGCTTACGTCTTTCTGGGCAAAGAATTGGGAGGACGTAGCGAAAATCCGAGCTGCTATGATCAG GGTAGGATTCAGTATGAACGACTGGCAAATGAGCCAGCCTTCCTCGAAGGGATCGACCGTCTGATCCAAGGTTCTAGTCG GTATCGGATCGCACTGATGTGTGCTGAGAAAGACCCTATTGAATGTCATAGATCGTTGCTGGTGGCGCGTAAACTTTTTC AAAGTGGGATTCCGGTCAACCACATCTTGGCCAATGGCTCTTTGGAGACTCATGAGGCTCTAGAATCTCGTCTTCTTGCC CTTTGCAAACTTCCAGAGGGGGACTTGTTTAGAAGTCGGGAAGAGTTTATAGCCGAAGCCTATCTCATTCAAGGCAGGCG TGTCGCCTATCGAGATGAGAAAATGTCAAAAAGTGATGAGCGGAGCGCGAGGCCATGA
Upstream 100 bases:
>100_bases ATGACATCCCCGATCCGGTGCTGTGTGTTAGCCTTAGCGATCCCTACTTGGGCTATTACTACAAGCTGATAGCGGCTGTT CTCTACTCAGGTCGACTCAT
Downstream 100 bases:
>100_bases AGATATTTACGATAGGGTTTACGAAGAAAAGTGCAGAGCAATTTTTTAATCGCTTAAAACAGCCTGGTCTGGTTCGAGTT GTTGATACTCGACTTAATAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MKSEIYTIGHSNHEIDFFIDLLRQYNITGIGDVRSRPYSRYVPQYSQEKLKSALAAAGIAYVFLGKELGGRSENPSCYDQ GRIQYERLANEPAFLEGIDRLIQGSSRYRIALMCAEKDPIECHRSLLVARKLFQSGIPVNHILANGSLETHEALESRLLA LCKLPEGDLFRSREEFIAEAYLIQGRRVAYRDEKMSKSDERSARP
Sequences:
>Translated_205_residues MKSEIYTIGHSNHEIDFFIDLLRQYNITGIGDVRSRPYSRYVPQYSQEKLKSALAAAGIAYVFLGKELGGRSENPSCYDQ GRIQYERLANEPAFLEGIDRLIQGSSRYRIALMCAEKDPIECHRSLLVARKLFQSGIPVNHILANGSLETHEALESRLLA LCKLPEGDLFRSREEFIAEAYLIQGRRVAYRDEKMSKSDERSARP >Mature_205_residues MKSEIYTIGHSNHEIDFFIDLLRQYNITGIGDVRSRPYSRYVPQYSQEKLKSALAAAGIAYVFLGKELGGRSENPSCYDQ GRIQYERLANEPAFLEGIDRLIQGSSRYRIALMCAEKDPIECHRSLLVARKLFQSGIPVNHILANGSLETHEALESRLLA LCKLPEGDLFRSREEFIAEAYLIQGRRVAYRDEKMSKSDERSARP
Specific function: Unknown
COG id: COG5483
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23361; Mature: 23361
Theoretical pI: Translated: 7.96; Mature: 7.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSEIYTIGHSNHEIDFFIDLLRQYNITGIGDVRSRPYSRYVPQYSQEKLKSALAAAGIA CCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHH YVFLGKELGGRSENPSCYDQGRIQYERLANEPAFLEGIDRLIQGSSRYRIALMCAEKDPI HHHHHHHHCCCCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHH ECHRSLLVARKLFQSGIPVNHILANGSLETHEALESRLLALCKLPEGDLFRSREEFIAEA HHHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YLIQGRRVAYRDEKMSKSDERSARP HHHCCCHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKSEIYTIGHSNHEIDFFIDLLRQYNITGIGDVRSRPYSRYVPQYSQEKLKSALAAAGIA CCCCEEEECCCCCHHHHHHHHHHHCCCCCCCHHHCCCHHHHCCCHHHHHHHHHHHHHHHH YVFLGKELGGRSENPSCYDQGRIQYERLANEPAFLEGIDRLIQGSSRYRIALMCAEKDPI HHHHHHHHCCCCCCCCCHHCCCHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEECCCCHH ECHRSLLVARKLFQSGIPVNHILANGSLETHEALESRLLALCKLPEGDLFRSREEFIAEA HHHHHHHHHHHHHHCCCCHHHEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHH YLIQGRRVAYRDEKMSKSDERSARP HHHCCCHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA