| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607884
Identifier: 86607884
GI number: 86607884
Start: 401389
End: 402072
Strand: Reverse
Name: 86607884
Synonym: CYB_0387
Alternate gene names: NA
Gene position: 402072-401389 (Counterclockwise)
Preceding gene: 86607885
Following gene: 86607883
Centisome position: 13.2
GC content: 51.32
Gene sequence:
>684_bases ATGTCTTACGTCAAGACGATTGTCTGTTTCGCCAACTCCAGAAAAATGGCCGGTCGCTGTATTGCCGGCAAGGAATGGCA GAACGGAGAGCCAGGAGAATGGGTGCGTCCTGTCAGCAGCCGCCCGTCACATGAGGTCTCTGAACATGAGAGGTACTACG AGAGCGGTGGCGACCCAGAACTTCTTGATATTCTCTGTGTCTCTTGTGATACACCTCAGCCACTACCTCACCAGAGGGAG AACCACGTTATCAATCCAAAGCACCGCTGGAAAAAAGTTGGCCACCTGCCTTGGGAGGATATCAACAGTTGGCTAGACAA CCCTGAGAATCTCTGGGGCACTGGCGAGAGCAGCTATGCTGGGTGGAACAACCGGTTAAGTGTCGGGCGAGAAAGCGGAG TTTCTCTTTACCTTGTACCGGTCGAGCATTTGCGTCTGTTGGTTGGTTACAAGGCACCAGGATACCCGAATTCTAAGCGT AGAGTACGCGGCGAGTTTGTATACAAGGGAGTAAAATACTGCATGGATGTTACCGATCCTGTGATTGAACGGGATTTCCT AATGGGCGAAGACGGTCAATATGACATCCCCGATCCGGTGCTGTGTGTTAGCCTTAGCGATCCCTACTTGGGCTATTACT ACAAGCTGATAGCGGCTGTTCTCTACTCAGGTCGACTCATATGA
Upstream 100 bases:
>100_bases TTTAATCCCCTTTCGCCCTGAAGAACGGATTTGACTACTGGACTTTCAAGAAGCCGAAAATTACTCCTATTGAGCCTTTG CCCTTGCCCCAGAAGCCTGT
Downstream 100 bases:
>100_bases AATCAGAGATCTACACGATTGGTCACTCAAACCACGAGATTGATTTTTTCATAGACTTACTGCGCCAGTACAACATCACC GGTATTGGCGACGTTCGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 227; Mature: 226
Protein sequence:
>227_residues MSYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPELLDILCVSCDTPQPLPHQRE NHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYAGWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKR RVRGEFVYKGVKYCMDVTDPVIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI
Sequences:
>Translated_227_residues MSYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPELLDILCVSCDTPQPLPHQRE NHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYAGWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKR RVRGEFVYKGVKYCMDVTDPVIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI >Mature_226_residues SYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPELLDILCVSCDTPQPLPHQREN HVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYAGWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKRR VRGEFVYKGVKYCMDVTDPVIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25922; Mature: 25790
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPE CCHHHEEEHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH LLDILCVSCDTPQPLPHQRENHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYA EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCC GWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKRRVRGEFVYKGVKYCMDVTDP CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH VIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI HHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPE CHHHEEEHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH LLDILCVSCDTPQPLPHQRENHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYA EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCC GWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKRRVRGEFVYKGVKYCMDVTDP CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH VIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI HHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA