Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607884

Identifier: 86607884

GI number: 86607884

Start: 401389

End: 402072

Strand: Reverse

Name: 86607884

Synonym: CYB_0387

Alternate gene names: NA

Gene position: 402072-401389 (Counterclockwise)

Preceding gene: 86607885

Following gene: 86607883

Centisome position: 13.2

GC content: 51.32

Gene sequence:

>684_bases
ATGTCTTACGTCAAGACGATTGTCTGTTTCGCCAACTCCAGAAAAATGGCCGGTCGCTGTATTGCCGGCAAGGAATGGCA
GAACGGAGAGCCAGGAGAATGGGTGCGTCCTGTCAGCAGCCGCCCGTCACATGAGGTCTCTGAACATGAGAGGTACTACG
AGAGCGGTGGCGACCCAGAACTTCTTGATATTCTCTGTGTCTCTTGTGATACACCTCAGCCACTACCTCACCAGAGGGAG
AACCACGTTATCAATCCAAAGCACCGCTGGAAAAAAGTTGGCCACCTGCCTTGGGAGGATATCAACAGTTGGCTAGACAA
CCCTGAGAATCTCTGGGGCACTGGCGAGAGCAGCTATGCTGGGTGGAACAACCGGTTAAGTGTCGGGCGAGAAAGCGGAG
TTTCTCTTTACCTTGTACCGGTCGAGCATTTGCGTCTGTTGGTTGGTTACAAGGCACCAGGATACCCGAATTCTAAGCGT
AGAGTACGCGGCGAGTTTGTATACAAGGGAGTAAAATACTGCATGGATGTTACCGATCCTGTGATTGAACGGGATTTCCT
AATGGGCGAAGACGGTCAATATGACATCCCCGATCCGGTGCTGTGTGTTAGCCTTAGCGATCCCTACTTGGGCTATTACT
ACAAGCTGATAGCGGCTGTTCTCTACTCAGGTCGACTCATATGA

Upstream 100 bases:

>100_bases
TTTAATCCCCTTTCGCCCTGAAGAACGGATTTGACTACTGGACTTTCAAGAAGCCGAAAATTACTCCTATTGAGCCTTTG
CCCTTGCCCCAGAAGCCTGT

Downstream 100 bases:

>100_bases
AATCAGAGATCTACACGATTGGTCACTCAAACCACGAGATTGATTTTTTCATAGACTTACTGCGCCAGTACAACATCACC
GGTATTGGCGACGTTCGCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MSYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPELLDILCVSCDTPQPLPHQRE
NHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYAGWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKR
RVRGEFVYKGVKYCMDVTDPVIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI

Sequences:

>Translated_227_residues
MSYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPELLDILCVSCDTPQPLPHQRE
NHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYAGWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKR
RVRGEFVYKGVKYCMDVTDPVIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI
>Mature_226_residues
SYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPELLDILCVSCDTPQPLPHQREN
HVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYAGWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKRR
VRGEFVYKGVKYCMDVTDPVIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25922; Mature: 25790

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPE
CCHHHEEEHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
LLDILCVSCDTPQPLPHQRENHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYA
EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCC
GWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKRRVRGEFVYKGVKYCMDVTDP
CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
VIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI
HHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SYVKTIVCFANSRKMAGRCIAGKEWQNGEPGEWVRPVSSRPSHEVSEHERYYESGGDPE
CHHHEEEHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHH
LLDILCVSCDTPQPLPHQRENHVINPKHRWKKVGHLPWEDINSWLDNPENLWGTGESSYA
EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHCCCHHCCCCCCCCCC
GWNNRLSVGRESGVSLYLVPVEHLRLLVGYKAPGYPNSKRRVRGEFVYKGVKYCMDVTDP
CCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCH
VIERDFLMGEDGQYDIPDPVLCVSLSDPYLGYYYKLIAAVLYSGRLI
HHHHHHHCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA