| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607865
Identifier: 86607865
GI number: 86607865
Start: 383136
End: 383615
Strand: Direct
Name: 86607865
Synonym: CYB_0368
Alternate gene names: NA
Gene position: 383136-383615 (Clockwise)
Preceding gene: 86607864
Following gene: 86607866
Centisome position: 12.58
GC content: 56.25
Gene sequence:
>480_bases GTGCCGATTACCCTCTACCTTCCTGCCAAGGCCATTCAAACTCTGGATCTCACCCCCGGCCATGAGCTGGTGAAAACCTT GATGGCCGATCCCGTGCGTGCTGCCCAGCAGGTGCAATGCGCCATCGATTGGCCGCGCAGCCCTGAGGATCCACGGGAGC TGTCCGAGATCCCGGAGGTGCGCCTGTGGTTTATTCGTTGGGATACAGTCTACCCCTGGATGCCCTACTTTCTCAATTGG CGCCAAGGAGAACTCGCCCGTTACGCGGCTATGATGGTGCCCCACCAATTCAACCCTCGGGAGGGTATTGTTTACAACCC AGAAGCGTTGGAGATCTTTGTCTATCAGAAGATCTTTGTGTTGATGCGGTGGTTTAAGCAGCAGAACCTGGGATCCGTTT CCATGCTGCGGGATATGGCTTTGGTGTTTGGCTTCGAGATCCAGCCGGAGTTTCTCGCCCTATGGGAGGCAGAGCCATGA
Upstream 100 bases:
>100_bases GGTTTTGCCCTCGATCTCACCCGCCTGGGGATCCCGGTGGCAGGCAAGATGGAACAGAGCTGAGATAAGCTGCATTTGCA AGCCAGATAGCTGTGTTGCC
Downstream 100 bases:
>100_bases AGGTGATGGTGGCCAACACCTGGCCGGGGATCCCAGGAGCTACGGCAGTGGCCGACGCTTGGCAGCAGGTGGTTCAACGC CCTTGGGGCCGGCTCAGTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MPITLYLPAKAIQTLDLTPGHELVKTLMADPVRAAQQVQCAIDWPRSPEDPRELSEIPEVRLWFIRWDTVYPWMPYFLNW RQGELARYAAMMVPHQFNPREGIVYNPEALEIFVYQKIFVLMRWFKQQNLGSVSMLRDMALVFGFEIQPEFLALWEAEP
Sequences:
>Translated_159_residues MPITLYLPAKAIQTLDLTPGHELVKTLMADPVRAAQQVQCAIDWPRSPEDPRELSEIPEVRLWFIRWDTVYPWMPYFLNW RQGELARYAAMMVPHQFNPREGIVYNPEALEIFVYQKIFVLMRWFKQQNLGSVSMLRDMALVFGFEIQPEFLALWEAEP >Mature_158_residues PITLYLPAKAIQTLDLTPGHELVKTLMADPVRAAQQVQCAIDWPRSPEDPRELSEIPEVRLWFIRWDTVYPWMPYFLNWR QGELARYAAMMVPHQFNPREGIVYNPEALEIFVYQKIFVLMRWFKQQNLGSVSMLRDMALVFGFEIQPEFLALWEAEP
Specific function: Unknown
COG id: COG5474
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18786; Mature: 18655
Theoretical pI: Translated: 4.78; Mature: 4.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 5.0 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPITLYLPAKAIQTLDLTPGHELVKTLMADPVRAAQQVQCAIDWPRSPEDPRELSEIPEV CCEEEEECHHHHHEECCCCCHHHHHHHHCCHHHHHHHEEEEEECCCCCCCHHHHHCCCCE RLWFIRWDTVYPWMPYFLNWRQGELARYAAMMVPHQFNPREGIVYNPEALEIFVYQKIFV EEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHH LMRWFKQQNLGSVSMLRDMALVFGFEIQPEFLALWEAEP HHHHHHHCCCCHHHHHHHHHHHHCCCCCHHEEEEECCCC >Mature Secondary Structure PITLYLPAKAIQTLDLTPGHELVKTLMADPVRAAQQVQCAIDWPRSPEDPRELSEIPEV CEEEEECHHHHHEECCCCCHHHHHHHHCCHHHHHHHEEEEEECCCCCCCHHHHHCCCCE RLWFIRWDTVYPWMPYFLNWRQGELARYAAMMVPHQFNPREGIVYNPEALEIFVYQKIFV EEEEEEECCCCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCCCEEECCCHHHHHHHHHHHH LMRWFKQQNLGSVSMLRDMALVFGFEIQPEFLALWEAEP HHHHHHHCCCCHHHHHHHHHHHHCCCCCHHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA