| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is sam [H]
Identifier: 86607835
GI number: 86607835
Start: 355765
End: 356694
Strand: Direct
Name: sam [H]
Synonym: CYB_0337
Alternate gene names: 86607835
Gene position: 355765-356694 (Clockwise)
Preceding gene: 86607834
Following gene: 86607844
Centisome position: 11.68
GC content: 61.29
Gene sequence:
>930_bases ATGTGGTATCGCCACCAGCTGAGCCGCTTTGCAGAGTGGGGAAAAATAAGGCTCTGGCAAGGAGTTGCCCTGAAGCTGCT GGCCACTGCTTGCTTTGCCTGTTTAGGCGCGATCATCCGGCTCAACACTCCCGCCCTTCACCCCTTTCAGATTGTGTTTT TGCGCAACCTATTCGGGTTTCTCGCCCTGTCGCCGCTGGTGTTGCGGGCTGGGATCCAGTCTCTGCACACCGCCAAGATG GAGTTTTACCTCCTGCGCTCGGCGATCAGCACGGTGGGGATGTTGCTCTCCTTTTGGGCAGCCAGCCTGTTGCCTCTGGC AGAAGCTACGGCGCTGAGCTTTGTTCAACTTTTGTTTGCCGGCACGATGGCGGTATGGGTGTTGGGCGAGCAGATGCGCT CGTCCCGCTGGCTGGGATTGGGCCTGGGGTTTGCCGGGGCTTTGGTGATGTTGAGGCCAGGCTTCCGAGAGTTTTCTCTG GGAACAGGGCTGGCCTTGGGGGCGGCAGCACTCTTTGCCTGGGTGACCATCGTGCTCAAGATCCTCTCCCGCACCGAGTC CAGCCTCACGATTACGGCCTACATGGGCCTGCTGCAGACCCCCCTTTCCTTTCTGGCTGCCGTCTGGGTTTGGACCTGGC CTTCTCCTGAGCAGTGGCTGTGGATGGTGGCCATGGGGCTACTGGGCAGCATTGGCCAGGTGGCCCTCGCCCAGGCCTAC AAGCTGGCTGAGGTGACGATGCTGCTGCCTCTGGATTTCTCCCGTCTGCTCTGGGCCAGCCTAATCGGGTTTTGGGTGTT TGCCGAGATCCCGGATGGGTGGACTTGGATGGGCGGAGCCTTGATCTTGGTGGGCGCCACCTCTGGAGCCTACGGCGAAG CCCGCCTGCCCACAATGCCGACCCAGGCCCGTACCGGCGGAGTTGGATAG
Upstream 100 bases:
>100_bases CAGGGGCGCAGTTCGGATCCCTGGAAGTCCGTTTAAGCTGAGAGTTCAAGGCTGAAAACTTAGTGCCTAAACCATTTGGG TGTGAGCTGTGACTTTGGAG
Downstream 100 bases:
>100_bases CAGACAGATATCCTCTGCCAGGACTTACAGCCGAGGGAGAACAGGGCTGGAGCTGGTCAGGTCTGTGGTGGTAAGGGCCA CCAACAGGGCTTCTGGACTG
Product: integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MWYRHQLSRFAEWGKIRLWQGVALKLLATACFACLGAIIRLNTPALHPFQIVFLRNLFGFLALSPLVLRAGIQSLHTAKM EFYLLRSAISTVGMLLSFWAASLLPLAEATALSFVQLLFAGTMAVWVLGEQMRSSRWLGLGLGFAGALVMLRPGFREFSL GTGLALGAAALFAWVTIVLKILSRTESSLTITAYMGLLQTPLSFLAAVWVWTWPSPEQWLWMVAMGLLGSIGQVALAQAY KLAEVTMLLPLDFSRLLWASLIGFWVFAEIPDGWTWMGGALILVGATSGAYGEARLPTMPTQARTGGVG
Sequences:
>Translated_309_residues MWYRHQLSRFAEWGKIRLWQGVALKLLATACFACLGAIIRLNTPALHPFQIVFLRNLFGFLALSPLVLRAGIQSLHTAKM EFYLLRSAISTVGMLLSFWAASLLPLAEATALSFVQLLFAGTMAVWVLGEQMRSSRWLGLGLGFAGALVMLRPGFREFSL GTGLALGAAALFAWVTIVLKILSRTESSLTITAYMGLLQTPLSFLAAVWVWTWPSPEQWLWMVAMGLLGSIGQVALAQAY KLAEVTMLLPLDFSRLLWASLIGFWVFAEIPDGWTWMGGALILVGATSGAYGEARLPTMPTQARTGGVG >Mature_309_residues MWYRHQLSRFAEWGKIRLWQGVALKLLATACFACLGAIIRLNTPALHPFQIVFLRNLFGFLALSPLVLRAGIQSLHTAKM EFYLLRSAISTVGMLLSFWAASLLPLAEATALSFVQLLFAGTMAVWVLGEQMRSSRWLGLGLGFAGALVMLRPGFREFSL GTGLALGAAALFAWVTIVLKILSRTESSLTITAYMGLLQTPLSFLAAVWVWTWPSPEQWLWMVAMGLLGSIGQVALAQAY KLAEVTMLLPLDFSRLLWASLIGFWVFAEIPDGWTWMGGALILVGATSGAYGEARLPTMPTQARTGGVG
Specific function: Transports S-adenosylmethionine [H]
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the drug/metabolite transporter (DMT) superfamily. 10 TMS drug/metabolite exporter (TC 2.A.7.3) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000620 [H]
Pfam domain/function: PF00892 DUF6 [H]
EC number: NA
Molecular weight: Translated: 33773; Mature: 33773
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWYRHQLSRFAEWGKIRLWQGVALKLLATACFACLGAIIRLNTPALHPFQIVFLRNLFGF CCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LALSPLVLRAGIQSLHTAKMEFYLLRSAISTVGMLLSFWAASLLPLAEATALSFVQLLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTMAVWVLGEQMRSSRWLGLGLGFAGALVMLRPGFREFSLGTGLALGAAALFAWVTIVLK HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHH ILSRTESSLTITAYMGLLQTPLSFLAAVWVWTWPSPEQWLWMVAMGLLGSIGQVALAQAY HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KLAEVTMLLPLDFSRLLWASLIGFWVFAEIPDGWTWMGGALILVGATSGAYGEARLPTMP HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC TQARTGGVG CCCCCCCCC >Mature Secondary Structure MWYRHQLSRFAEWGKIRLWQGVALKLLATACFACLGAIIRLNTPALHPFQIVFLRNLFGF CCHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH LALSPLVLRAGIQSLHTAKMEFYLLRSAISTVGMLLSFWAASLLPLAEATALSFVQLLFA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GTMAVWVLGEQMRSSRWLGLGLGFAGALVMLRPGFREFSLGTGLALGAAALFAWVTIVLK HHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHHHHHHHHHHH ILSRTESSLTITAYMGLLQTPLSFLAAVWVWTWPSPEQWLWMVAMGLLGSIGQVALAQAY HHHCCCCCEEHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH KLAEVTMLLPLDFSRLLWASLIGFWVFAEIPDGWTWMGGALILVGATSGAYGEARLPTMP HHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCEECCCEEEEEECCCCCCCCCCCCCCC TQARTGGVG CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA