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The map label for this gene is rfaC [C]

Identifier: 86607834

GI number: 86607834

Start: 354383

End: 355504

Strand: Direct

Name: rfaC [C]

Synonym: CYB_0336

Alternate gene names: 86607834

Gene position: 354383-355504 (Clockwise)

Preceding gene: 86607833

Following gene: 86607835

Centisome position: 11.63

GC content: 61.23

Gene sequence:

>1122_bases
ATGCAACGGTTTGCCAACCAACCTCTGCGGGAACATCCCCACCTGGCGGTGTTTTCCTCCAGCAAGGTGGGCAATTTTGT
GGTTACCATCCCGCTGTTGCGGGGCCTCAAGGAAAAATACCCCGGCTGTGTGCTGGATTTTTTTGGCAGCGAGATTACCC
GCGACTTTGAGCTCCACTGCCCCTACATCGACTTCAGCTTTCCTCTCTACAGCCGTCGTCCCGATTACCTCGAGGCCCTG
ACCGCTGCTGTGCGAGAACGGGTGACCCAGGCCGGCCCCTACGACTTGGCCATCAATTGCGACGAGTTTAGCGAGCTCAA
CCTGGTGGCGGTAACGGCCCTGCGCCCCCAGTACATTGCCGGGGCCGGCTTGACTCTGGATTTTCGCCGCAAGTTGGACC
CCGGCTCCGACCCGGTACAGCGCATGCTCCAGGATGACGACTGGAACGGCCTGGAGTTTCTGCAGCGCTACAAAGGGATC
CTCACCAGCAACTACATCGCCGAAATCTTCTGTCGCCTGGCGTACGTGGAGACGGATTTTTTCCGCCTGGAGCTGCCCAG
CCGGGATCCCGGTTTTCCGGTGCCAGAGGTTTTGGTGCACATCACCACTACCCGCCGCGCCAAGATGTGGCCTCTGGAGT
ACTGGCGGCAGGTGATCCAGTGGTGCCAAGGCCAGGGCCTGCAGGTGGGGCTAATCGGCAGCGCGCCGGAGCTGCAGCGA
TCCCTCTACCACGGCGGCAGCAGCGAAGACGAACTGCTGGCCCAAACGGGAATGGTTGACCTGCGGGGCAAAACCAGCCT
CATGGAGCTGGCGGGGGCCCTGAAGCGGGCGCGGGTGTGTATCTCCGTGGATGCGGGGCCGATGCACATCGCGGCGGCAG
TGGGCTGTCCCACCATTGCCCTGTTTGGCAACGATGCCGATGGGGATGGGGCCAGCCCGGTGCGACTGTGGGCTCCTCGT
CTGCCCCACGTCTATCTCACCCAAACCGCCTACAAGTGCCGGGTCTGCGCAGAGAACAAGTTCAAAAACGAAACCTGCCT
GGTGGAGGGTCATCCCTGTATGGCCCATCTCAAGCCGGAAACGGTCATCGGCTACTTGAAAGAGATTCTCAAGCAAACCT
AG

Upstream 100 bases:

>100_bases
AAGCACAGGACAGAGGAATGCTAGCCTAGCAAAAGTGCTCTGTCTGCACCACCCGCACCACCTCCAGCGGGGTTGATATC
TTCCTGGGGATCCCAGCCTT

Downstream 100 bases:

>100_bases
AGGTTCCACGCCCTCACCCCCAGCCCCTCTCCCAAAGAGAGAGGGGAGCTATGGAGCGACGGGGTGAGTTGTTTCATGGC
TACTTGAAATGGCCATGTCT

Product: heptosyltransferase family protein

Products: NA

Alternate protein names: Lipopolysaccharide Heptosyltransferase II; ADP-Heptose-LPS Heptosyltransferase II; Glycosyl Transferase; Heptosyltransferase Family Protein; ADP-HeptoseLPS Heptosyltransferase-Like; LPS Heptosyltransferase II; Lipopolysaccharide Heptosyltransferase I; Family Glycosyltransferase; ADP-HeptoseLPS Heptosyltransferase II; Lipopolysaccharide Core Biosynthesis Heptosyltransferase; Heptosyltransferase; Lipopolysaccharide Core Biosynthesis Protein; Glycosyltransferase; Family 9 Glycosyl Transferase; Glycosyltransferase Family Protein

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MQRFANQPLREHPHLAVFSSSKVGNFVVTIPLLRGLKEKYPGCVLDFFGSEITRDFELHCPYIDFSFPLYSRRPDYLEAL
TAAVRERVTQAGPYDLAINCDEFSELNLVAVTALRPQYIAGAGLTLDFRRKLDPGSDPVQRMLQDDDWNGLEFLQRYKGI
LTSNYIAEIFCRLAYVETDFFRLELPSRDPGFPVPEVLVHITTTRRAKMWPLEYWRQVIQWCQGQGLQVGLIGSAPELQR
SLYHGGSSEDELLAQTGMVDLRGKTSLMELAGALKRARVCISVDAGPMHIAAAVGCPTIALFGNDADGDGASPVRLWAPR
LPHVYLTQTAYKCRVCAENKFKNETCLVEGHPCMAHLKPETVIGYLKEILKQT

Sequences:

>Translated_373_residues
MQRFANQPLREHPHLAVFSSSKVGNFVVTIPLLRGLKEKYPGCVLDFFGSEITRDFELHCPYIDFSFPLYSRRPDYLEAL
TAAVRERVTQAGPYDLAINCDEFSELNLVAVTALRPQYIAGAGLTLDFRRKLDPGSDPVQRMLQDDDWNGLEFLQRYKGI
LTSNYIAEIFCRLAYVETDFFRLELPSRDPGFPVPEVLVHITTTRRAKMWPLEYWRQVIQWCQGQGLQVGLIGSAPELQR
SLYHGGSSEDELLAQTGMVDLRGKTSLMELAGALKRARVCISVDAGPMHIAAAVGCPTIALFGNDADGDGASPVRLWAPR
LPHVYLTQTAYKCRVCAENKFKNETCLVEGHPCMAHLKPETVIGYLKEILKQT
>Mature_373_residues
MQRFANQPLREHPHLAVFSSSKVGNFVVTIPLLRGLKEKYPGCVLDFFGSEITRDFELHCPYIDFSFPLYSRRPDYLEAL
TAAVRERVTQAGPYDLAINCDEFSELNLVAVTALRPQYIAGAGLTLDFRRKLDPGSDPVQRMLQDDDWNGLEFLQRYKGI
LTSNYIAEIFCRLAYVETDFFRLELPSRDPGFPVPEVLVHITTTRRAKMWPLEYWRQVIQWCQGQGLQVGLIGSAPELQR
SLYHGGSSEDELLAQTGMVDLRGKTSLMELAGALKRARVCISVDAGPMHIAAAVGCPTIALFGNDADGDGASPVRLWAPR
LPHVYLTQTAYKCRVCAENKFKNETCLVEGHPCMAHLKPETVIGYLKEILKQT

Specific function: Heptose Transfer To The Lipopolysaccharide Core. It Transfers The Innnermost Heptose To [4'-P](3-Deoxy-D-Manno- Octulosonic Acid)2-IVa. [C]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 2.4.1.-

Molecular weight: Translated: 41900; Mature: 41900

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQRFANQPLREHPHLAVFSSSKVGNFVVTIPLLRGLKEKYPGCVLDFFGSEITRDFELHC
CCCCCCCCHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCEEEEHHHHHHCCCEEEEC
PYIDFSFPLYSRRPDYLEALTAAVRERVTQAGPYDLAINCDEFSELNLVAVTALRPQYIA
CEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHC
GAGLTLDFRRKLDPGSDPVQRMLQDDDWNGLEFLQRYKGILTSNYIAEIFCRLAYVETDF
CCCCEEEHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCE
FRLELPSRDPGFPVPEVLVHITTTRRAKMWPLEYWRQVIQWCQGQGLQVGLIGSAPELQR
EEEECCCCCCCCCHHHHHEEEECCCCCEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHH
SLYHGGSSEDELLAQTGMVDLRGKTSLMELAGALKRARVCISVDAGPMHIAAAVGCPTIA
HHHCCCCCCHHHHHHCCCEEECCCHHHHHHHHHHHHCEEEEEECCCCEEEEECCCCCEEE
LFGNDADGDGASPVRLWAPRLPHVYLTQTAYKCRVCAENKFKNETCLVEGHPCMAHLKPE
EECCCCCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEECCHH
TVIGYLKEILKQT
HHHHHHHHHHHCC
>Mature Secondary Structure
MQRFANQPLREHPHLAVFSSSKVGNFVVTIPLLRGLKEKYPGCVLDFFGSEITRDFELHC
CCCCCCCCHHHCCCEEEEECCCCCCEEEEHHHHHHHHHHCCCEEEEHHHHHHCCCEEEEC
PYIDFSFPLYSRRPDYLEALTAAVRERVTQAGPYDLAINCDEFSELNLVAVTALRPQYIA
CEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCEEEEEECCCCHHC
GAGLTLDFRRKLDPGSDPVQRMLQDDDWNGLEFLQRYKGILTSNYIAEIFCRLAYVETDF
CCCCEEEHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEECCE
FRLELPSRDPGFPVPEVLVHITTTRRAKMWPLEYWRQVIQWCQGQGLQVGLIGSAPELQR
EEEECCCCCCCCCHHHHHEEEECCCCCEECCHHHHHHHHHHHCCCCCEEEEECCCHHHHH
SLYHGGSSEDELLAQTGMVDLRGKTSLMELAGALKRARVCISVDAGPMHIAAAVGCPTIA
HHHCCCCCCHHHHHHCCCEEECCCHHHHHHHHHHHHCEEEEEECCCCEEEEECCCCCEEE
LFGNDADGDGASPVRLWAPRLPHVYLTQTAYKCRVCAENKFKNETCLVEGHPCMAHLKPE
EECCCCCCCCCCCCEEECCCCCEEEEECCCEEEEEECCCCCCCCEEEEECCCCEEECCHH
TVIGYLKEILKQT
HHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA