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The map label for this gene is ybbK [C]

Identifier: 86607823

GI number: 86607823

Start: 340498

End: 341463

Strand: Reverse

Name: ybbK [C]

Synonym: CYB_0324

Alternate gene names: 86607823

Gene position: 341463-340498 (Counterclockwise)

Preceding gene: 86607827

Following gene: 86607822

Centisome position: 11.21

GC content: 57.87

Gene sequence:

>966_bases
ATGCCAGGTATCTTAGCGGCCATTGCCCTGATCTTTGTCGGCTACCTGTTCAACTCGGTCAAAATCATCAGCCAGGGGTA
TGAGGCATTGGTGGAGCGTTTGGGCAGGTTTCATCGCAAGCTGACCCCAGGATTGCACTTTATTCTTCCCCCTATCGATA
GGATTGTGTTCCAGGAAACCATCCGCGAGAAGGTGTTGGACGTGCCTCCTCAGCAGTGCATCACCAGCGACAACGTCTCT
TTGATGGCCGATGCGGTGGTCTATTGGCGCATCACCGACATGATCAAGGCCCGCTATGCGGTGGAGGACGTGCAGCGGGC
TTTGGTTAACCTGGTGCTGACGGCTCTGCGGGCAGAAATTGGCCGCATGGATTTGGATCAAACCTTTTCCTCCCGCGCCG
AGATCAACGCCCGCCTTTTGACAGAGCTGGACGAGGCCACAGATCCCTGGGGGATCAAGATCACCCGCGTGGAAGTCAGG
GACATTCAACCCTCTAAGACTGTGCAAGACTCGATGGAAAAGCAGATGGCTGCCGAGCGGGAGAAGCGGGCCGCCATTCT
GAAATCAGAAGGGGAGCAGCAGGCCAGCATCAACCAAGCGGCTGGGGCCGCCAAGGCGCAGCTATTGCGGGCAGAAGCGG
AGAAACGGGAGCGGCTGCTGTTGGCTGAGGGCACGGCTGAAGCCATCAAGACCATCGCCGCCACTTTGCAAGAGAATCCA
GAGGCAGCCAATGCGTTGCAATACCTGATGGCGCAAAACTATATCGACATGGGCTTCAAGGTAGGCAGCAGTCCCAGCGC
CAAGGTAATCTTCATGGATCCCAATTCGATCCCTGGCACCCTGCAAGGGCTGCTCTCCATGGTGGACGTGGCCAAGGGTG
GGGAAGGATCTCGCGCGGCGGCCTCTCAGAAGCTGCGTACCCCGGCTTCTTTCCCAACCGAAGTGGACTTTCCGCGGCTC
GACTGA

Upstream 100 bases:

>100_bases
TTGGTCCATCGCGTTTCTGTTGAGATGTGATCGAGCTAAGGGAGCAGTCCCAGCAACCGTCTAGAATGGGGACTGAACTC
CCCCTTAGGAGAAAAGCCCT

Downstream 100 bases:

>100_bases
GTTTGACCGACCATGATGGCCCGGGATCCCGATTGGCTGCTGGTGGGACAGGTGGTGGCGGCCCACGGCTTGCGGGGCTG
GCTGCGGGTTAGGTGCTGGT

Product: HflC/HflK family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MPGILAAIALIFVGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHFILPPIDRIVFQETIREKVLDVPPQQCITSDNVS
LMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEIGRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVR
DIQPSKTVQDSMEKQMAAEREKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
EAANALQYLMAQNYIDMGFKVGSSPSAKVIFMDPNSIPGTLQGLLSMVDVAKGGEGSRAAASQKLRTPASFPTEVDFPRL
D

Sequences:

>Translated_321_residues
MPGILAAIALIFVGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHFILPPIDRIVFQETIREKVLDVPPQQCITSDNVS
LMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEIGRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVR
DIQPSKTVQDSMEKQMAAEREKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
EAANALQYLMAQNYIDMGFKVGSSPSAKVIFMDPNSIPGTLQGLLSMVDVAKGGEGSRAAASQKLRTPASFPTEVDFPRL
D
>Mature_320_residues
PGILAAIALIFVGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHFILPPIDRIVFQETIREKVLDVPPQQCITSDNVSL
MADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEIGRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVRD
IQPSKTVQDSMEKQMAAEREKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENPE
AANALQYLMAQNYIDMGFKVGSSPSAKVIFMDPNSIPGTLQGLLSMVDVAKGGEGSRAAASQKLRTPASFPTEVDFPRLD

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=277, Percent_Identity=38.9891696750903, Blast_Score=188, Evalue=7e-48,
Organism=Homo sapiens, GI221316744, Length=183, Percent_Identity=38.7978142076503, Blast_Score=111, Evalue=7e-25,
Organism=Homo sapiens, GI21686995, Length=183, Percent_Identity=38.7978142076503, Blast_Score=111, Evalue=9e-25,
Organism=Homo sapiens, GI38016911, Length=200, Percent_Identity=36, Blast_Score=107, Evalue=1e-23,
Organism=Homo sapiens, GI7657615, Length=191, Percent_Identity=25.6544502617801, Blast_Score=76, Evalue=4e-14,
Organism=Escherichia coli, GI1786697, Length=292, Percent_Identity=40.4109589041096, Blast_Score=219, Evalue=3e-58,
Organism=Escherichia coli, GI1790617, Length=314, Percent_Identity=24.5222929936306, Blast_Score=77, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI32564147, Length=276, Percent_Identity=37.6811594202899, Blast_Score=181, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17569493, Length=196, Percent_Identity=35.2040816326531, Blast_Score=114, Evalue=5e-26,
Organism=Caenorhabditis elegans, GI193209764, Length=196, Percent_Identity=35.2040816326531, Blast_Score=114, Evalue=9e-26,
Organism=Caenorhabditis elegans, GI17569499, Length=183, Percent_Identity=37.1584699453552, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI71987612, Length=180, Percent_Identity=37.7777777777778, Blast_Score=106, Evalue=1e-23,
Organism=Caenorhabditis elegans, GI71987621, Length=181, Percent_Identity=37.5690607734807, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI25153583, Length=179, Percent_Identity=37.9888268156425, Blast_Score=106, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71989948, Length=183, Percent_Identity=37.1584699453552, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI71989955, Length=183, Percent_Identity=37.1584699453552, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI32566490, Length=183, Percent_Identity=34.9726775956284, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17569497, Length=215, Percent_Identity=31.6279069767442, Blast_Score=96, Evalue=3e-20,
Organism=Caenorhabditis elegans, GI17570161, Length=206, Percent_Identity=34.4660194174757, Blast_Score=92, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI193210507, Length=206, Percent_Identity=34.4660194174757, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI17570459, Length=190, Percent_Identity=34.2105263157895, Blast_Score=91, Evalue=6e-19,
Organism=Caenorhabditis elegans, GI17542664, Length=181, Percent_Identity=31.4917127071823, Blast_Score=69, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI71989963, Length=122, Percent_Identity=34.4262295081967, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI45550506, Length=298, Percent_Identity=35.2348993288591, Blast_Score=187, Evalue=1e-47,
Organism=Drosophila melanogaster, GI62484448, Length=198, Percent_Identity=36.3636363636364, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24657857, Length=198, Percent_Identity=36.3636363636364, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI281365664, Length=198, Percent_Identity=36.3636363636364, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI62484274, Length=198, Percent_Identity=36.3636363636364, Blast_Score=114, Evalue=7e-26,
Organism=Drosophila melanogaster, GI45556022, Length=191, Percent_Identity=35.0785340314136, Blast_Score=113, Evalue=1e-25,
Organism=Drosophila melanogaster, GI18860517, Length=182, Percent_Identity=34.0659340659341, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356845, Length=193, Percent_Identity=32.6424870466321, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI281361631, Length=191, Percent_Identity=31.413612565445, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281361633, Length=196, Percent_Identity=31.6326530612245, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI28573263, Length=190, Percent_Identity=30.5263157894737, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI281361635, Length=136, Percent_Identity=31.6176470588235, Blast_Score=70, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 35351; Mature: 35220

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPGILAAIALIFVGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHFILPPIDRIVFQET
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH
IREKVLDVPPQQCITSDNVSLMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEI
HHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVRDIQPSKTVQDSMEKQMAAER
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
EKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCC
EAANALQYLMAQNYIDMGFKVGSSPSAKVIFMDPNSIPGTLQGLLSMVDVAKGGEGSRAA
CHHHHHHHHHHHHHHHHCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH
ASQKLRTPASFPTEVDFPRLD
HHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PGILAAIALIFVGYLFNSVKIISQGYEALVERLGRFHRKLTPGLHFILPPIDRIVFQET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHHHH
IREKVLDVPPQQCITSDNVSLMADAVVYWRITDMIKARYAVEDVQRALVNLVLTALRAEI
HHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GRMDLDQTFSSRAEINARLLTELDEATDPWGIKITRVEVRDIQPSKTVQDSMEKQMAAER
CCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHHH
EKRAAILKSEGEQQASINQAAGAAKAQLLRAEAEKRERLLLAEGTAEAIKTIAATLQENP
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHCCC
EAANALQYLMAQNYIDMGFKVGSSPSAKVIFMDPNSIPGTLQGLLSMVDVAKGGEGSRAA
CHHHHHHHHHHHHHHHHCEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHH
ASQKLRTPASFPTEVDFPRLD
HHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]