| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
Click here to switch to the map view.
The map label for this gene is minC [H]
Identifier: 86607815
GI number: 86607815
Start: 331930
End: 332664
Strand: Direct
Name: minC [H]
Synonym: CYB_0316
Alternate gene names: 86607815
Gene position: 331930-332664 (Clockwise)
Preceding gene: 86607801
Following gene: 86607816
Centisome position: 10.89
GC content: 59.18
Gene sequence:
>735_bases ATGACGGGATCCCCTACATGGAACCCTGAAATCTCCTCATCTCCAGACTCCTGGGCCACGGGCAGCGTTTACTTTCGGTC GGATGCCCAGGGGATCCATCTGCACTTGCCCAGCACCTTGCCTTGGGAGGAGCTTTGGGAAAACCTGGTTTGGCAGTTGC GCAGCCGCAAACCCTACTGGGCCGGAGTCGCTCCCCTCACCCTCTGGAGCCAGCAGCGAGAGCTGGACATGCCCACCCTA CAACTTCTTGCTGCCCTATTGTCTCAGCATGGACTGCAACTGTGGCGCGTTCAAACTCGATCCCGCTCGACAGCGATTGC AGCAGCGACGTTGGGGTATTCTGTGGAGCAATCTTCCCTTTTGGAGGCAGTTCCCCTTGCTCCCCCAGACACCACACCTC TGTACCTACGTTCGACAGTGCGCTCTGGCATGTCCGTGCGTCACAGAGGATCCGTATTCCTGTTGGGGGATCTCAACCCC GGCGGCGAGATCATTGCCGGAGGAGACGTTTGGGTTTGGGGACGCTTGCGGGGCCTGGTTCACGCGGGGGCCGACGGCGA CAAGGGAGCTGTAATTTTGGCTTTGCAGTTGGAGCCCACTCAGTTGCGCATTGCCGATCAAGTGGCCCGTCCGCCAGAAG GTGGATCCCTGCCCAACACCCCTGAAGTGGTTTACCTGCAGGAGGATGTCATCTGCGTCGCCAGCCTTCAGGATTTTTTG CGGAGAGGAGTATGA
Upstream 100 bases:
>100_bases CCGCTTTGCTATCAAGGGCAACCGCCGAGAGAGTTTCCCCTGGCTTGGGGGAATGGAATAGGATAGGGCTCTATATTCAG GCAGACGTTTAAGGGCGGTC
Downstream 100 bases:
>100_bases GCCGAGTCATTGTCATAACCTCTGGTAAAGGTGGAGTCGGCAAAACCACCGTGACGGCCAACCTGGGCACTGCCTTGGCG CGCTTGGGTCGCTCGGTGGT
Product: septum formation inhibitor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYWAGVAPLTLWSQQRELDMPTL QLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSLLEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNP GGEIIAGGDVWVWGRLRGLVHAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL RRGV
Sequences:
>Translated_244_residues MTGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYWAGVAPLTLWSQQRELDMPTL QLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSLLEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNP GGEIIAGGDVWVWGRLRGLVHAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL RRGV >Mature_243_residues TGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYWAGVAPLTLWSQQRELDMPTLQ LLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSLLEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNPG GEIIAGGDVWVWGRLRGLVHAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFLR RGV
Specific function: Cell division inhibitor that blocks the formation of polar Z ring septums. Rapidly oscillates between the poles of the cell to destabilize ftsZ filaments that have formed before they mature into polar Z rings. Prevents ftsZ polymerization [H]
COG id: COG0850
COG function: function code D; Septum formation inhibitor
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the minC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR016098 - InterPro: IPR013033 - InterPro: IPR005526 [H]
Pfam domain/function: PF03775 MinC_C [H]
EC number: NA
Molecular weight: Translated: 26746; Mature: 26615
Theoretical pI: Translated: 6.01; Mature: 6.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYW CCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC AGVAPLTLWSQQRELDMPTLQLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSL CCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHCCCCCHHHH LEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNPGGEIIAGGDVWVWGRLRGLV HHHCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEECCCEEEEEEEHHHE HAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL ECCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEHHHHHHHH RRGV HHCC >Mature Secondary Structure TGSPTWNPEISSSPDSWATGSVYFRSDAQGIHLHLPSTLPWEELWENLVWQLRSRKPYW CCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCC AGVAPLTLWSQQRELDMPTLQLLAALLSQHGLQLWRVQTRSRSTAIAAATLGYSVEQSSL CCCCHHHCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEEHHCCCCCHHHH LEAVPLAPPDTTPLYLRSTVRSGMSVRHRGSVFLLGDLNPGGEIIAGGDVWVWGRLRGLV HHHCCCCCCCCCHHHHHHHHHCCCCEEECCCEEEEECCCCCCCEEECCCEEEEEEEHHHE HAGADGDKGAVILALQLEPTQLRIADQVARPPEGGSLPNTPEVVYLQEDVICVASLQDFL ECCCCCCCCEEEEEEEECCCHHHHHHHHCCCCCCCCCCCCCCEEEEECCEEEHHHHHHHH RRGV HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 14621292 [H]