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The map label for this gene is ftsY [H]

Identifier: 86607811

GI number: 86607811

Start: 327028

End: 328524

Strand: Reverse

Name: ftsY [H]

Synonym: CYB_0312

Alternate gene names: 86607811

Gene position: 328524-327028 (Counterclockwise)

Preceding gene: 86607812

Following gene: 86607810

Centisome position: 10.78

GC content: 60.25

Gene sequence:

>1497_bases
ATGGCCTTCGATTGGTTTCGCCGCCGCTATACCGACTCTACCGACTCTTCTGGTGAAGCAGAGCCTTCGCCACCGGCCCC
GGAACCGGCGGAGATCTCCCCGGAAGACTATTTGGCCTTCGCCAAAGCCGCCTATGCCAACCTGAAGGCCCGTACCGCTG
CCCAAGCCCCACCGGCAACCCAGGACTCTGTCCCACCTGCGCCAGCGGAAGGGATCCCTGCAGAATCCGTCCAGCCACAG
CCACCGGCCTCGACTGAGGACTCCGGCCCACTTGCCCAAGCAGAACCCCGTGAACCCGTCCAGTCCTCCACTCCAACACA
AGAACCAGCATCTCCAGAATCGCCCCCTGTGCAGCCGGCGGCAGCTCCCTCGTTTTTCGATCTGGCTCCCCGTGCTGCTG
AGCGTCTCCAAGCCCTGCAAGCCAGCGCCGTGGATGAGCCCAAACCCGAGCCGGTGACTCCAGCCGTTGCTCCTTCTCCA
GAGACTGGGCCGGAAGAGCTGGTCTTCGATGAGGGCTTCCGCTGGTCAGCCGAGATCCTGGCGGCCCAAGGGCGCAAACC
GGAAGAGATTTCCGTTGAGGAAATCTCCTGGCTGCAAAAGCTGCGGCGAGGCTTGGGCAAAACTCGCCTTAACCTGATCA
ACCAGTTGAAAGCCCTGGTAGGCCGCGGCCCCCTGGATCAGAAGGCTGTGGAAGAAATTGAGGCCCTGTTGCTGCAGGCC
GATGTGGGGATCGACGCCACCGAGCAGATCATCCAAGCCCTACAAAAGCGCATGCGAGAGGAGGTGGTGCCCCCAGAGGA
GGCCGTCAAATACCTCAAGCAGCAGATGCGGCAGATGTTGACGGTGGGGAATCCCACCTTTGCCCCACAACGGGACACGC
TCAACATTTGGCTGATTGTCGGGGTGAATGGGGCGGGCAAAACCACCACCATTGGCAAAATTGCCCATGTCGCCCGCAAG
TCTGGATACCGCTGTCTGATTGCTGCTGCTGATACTTTCCGGGCTGCTGCTGTGGAGCAGCTCAAGGTTTGGGCAGAGCG
AGCAGGGGTAGAGGTAATCGCCAATCCCTCTCCCAATGCCGATCCGGCAGCGGTGGTTTTTGACGCCATCACAGCCGCCA
AGGCCAGGGGCACCGAGTTGCTGTTGGTGGACACGGCAGGCCGTCTGCAAAACAAGAAAAACCTGATGGACGAGCTAGCC
AAGATCCGCCGCATCGTTGACAAAAAAGCTCCCGAAGCCAAAGTAGAAAGCCTTCTGGTGCTGGATGCCACCCAAGGGCA
AAACGGGTTGCGCCAAGCCGAGGTGTTTGCCGAGGCTGCCAAGTTGAGCGGTGTGATCCTGACTAAGCTGGATAGCACCG
CCAAGGGGGGGATTGCCCTGGCCATTACGCAGCAGATGAACCTGCCCATCCGCTTTATCGGCGCCGGCGAGGGGCTAGAA
GATCTGCGGCCTTTTTCCAGCTACGAGTTTGTGGAAGCTCTTCTAAGCGAGTATTGA

Upstream 100 bases:

>100_bases
GGATCCCCATTGAGCAGGGATGAGCTCCCCAGGGCTGCGCTCTAGCAGGAGAGCTGCTCTGTCAAACTGGATAAAGATCA
GCCAGGCTGGAGATGGGATT

Downstream 100 bases:

>100_bases
GGCACCCCCTCTCTGAGAAGGGCCATTGTGAAAGAGAGACACACAGATCCAGGCTTTGTTGGGCGTCGCCCCCGCTTTCT
GCCCTGGAGTGCTGCAGTGG

Product: signal recognition particle-docking protein FtsY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 498; Mature: 497

Protein sequence:

>498_residues
MAFDWFRRRYTDSTDSSGEAEPSPPAPEPAEISPEDYLAFAKAAYANLKARTAAQAPPATQDSVPPAPAEGIPAESVQPQ
PPASTEDSGPLAQAEPREPVQSSTPTQEPASPESPPVQPAAAPSFFDLAPRAAERLQALQASAVDEPKPEPVTPAVAPSP
ETGPEELVFDEGFRWSAEILAAQGRKPEEISVEEISWLQKLRRGLGKTRLNLINQLKALVGRGPLDQKAVEEIEALLLQA
DVGIDATEQIIQALQKRMREEVVPPEEAVKYLKQQMRQMLTVGNPTFAPQRDTLNIWLIVGVNGAGKTTTIGKIAHVARK
SGYRCLIAAADTFRAAAVEQLKVWAERAGVEVIANPSPNADPAAVVFDAITAAKARGTELLLVDTAGRLQNKKNLMDELA
KIRRIVDKKAPEAKVESLLVLDATQGQNGLRQAEVFAEAAKLSGVILTKLDSTAKGGIALAITQQMNLPIRFIGAGEGLE
DLRPFSSYEFVEALLSEY

Sequences:

>Translated_498_residues
MAFDWFRRRYTDSTDSSGEAEPSPPAPEPAEISPEDYLAFAKAAYANLKARTAAQAPPATQDSVPPAPAEGIPAESVQPQ
PPASTEDSGPLAQAEPREPVQSSTPTQEPASPESPPVQPAAAPSFFDLAPRAAERLQALQASAVDEPKPEPVTPAVAPSP
ETGPEELVFDEGFRWSAEILAAQGRKPEEISVEEISWLQKLRRGLGKTRLNLINQLKALVGRGPLDQKAVEEIEALLLQA
DVGIDATEQIIQALQKRMREEVVPPEEAVKYLKQQMRQMLTVGNPTFAPQRDTLNIWLIVGVNGAGKTTTIGKIAHVARK
SGYRCLIAAADTFRAAAVEQLKVWAERAGVEVIANPSPNADPAAVVFDAITAAKARGTELLLVDTAGRLQNKKNLMDELA
KIRRIVDKKAPEAKVESLLVLDATQGQNGLRQAEVFAEAAKLSGVILTKLDSTAKGGIALAITQQMNLPIRFIGAGEGLE
DLRPFSSYEFVEALLSEY
>Mature_497_residues
AFDWFRRRYTDSTDSSGEAEPSPPAPEPAEISPEDYLAFAKAAYANLKARTAAQAPPATQDSVPPAPAEGIPAESVQPQP
PASTEDSGPLAQAEPREPVQSSTPTQEPASPESPPVQPAAAPSFFDLAPRAAERLQALQASAVDEPKPEPVTPAVAPSPE
TGPEELVFDEGFRWSAEILAAQGRKPEEISVEEISWLQKLRRGLGKTRLNLINQLKALVGRGPLDQKAVEEIEALLLQAD
VGIDATEQIIQALQKRMREEVVPPEEAVKYLKQQMRQMLTVGNPTFAPQRDTLNIWLIVGVNGAGKTTTIGKIAHVARKS
GYRCLIAAADTFRAAAVEQLKVWAERAGVEVIANPSPNADPAAVVFDAITAAKARGTELLLVDTAGRLQNKKNLMDELAK
IRRIVDKKAPEAKVESLLVLDATQGQNGLRQAEVFAEAAKLSGVILTKLDSTAKGGIALAITQQMNLPIRFIGAGEGLED
LRPFSSYEFVEALLSEY

Specific function: Functional homolog of SRP receptor. Probably involved in the reception and insertion of a subset of proteins at the membrane [H]

COG id: COG0552

COG function: function code U; Signal recognition particle GTPase

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GTP-binding SRP family [H]

Homologues:

Organism=Homo sapiens, GI4507215, Length=275, Percent_Identity=30.9090909090909, Blast_Score=129, Evalue=6e-30,
Organism=Homo sapiens, GI226371618, Length=214, Percent_Identity=33.6448598130841, Blast_Score=125, Evalue=8e-29,
Organism=Homo sapiens, GI23308697, Length=326, Percent_Identity=28.5276073619632, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI295424842, Length=326, Percent_Identity=28.5276073619632, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI89061728, Length=135, Percent_Identity=34.0740740740741, Blast_Score=79, Evalue=1e-14,
Organism=Escherichia coli, GI1789874, Length=301, Percent_Identity=45.8471760797342, Blast_Score=246, Evalue=3e-66,
Organism=Escherichia coli, GI1788963, Length=282, Percent_Identity=35.1063829787234, Blast_Score=146, Evalue=3e-36,
Organism=Caenorhabditis elegans, GI17539958, Length=299, Percent_Identity=32.1070234113712, Blast_Score=143, Evalue=3e-34,
Organism=Caenorhabditis elegans, GI193206261, Length=314, Percent_Identity=29.9363057324841, Blast_Score=108, Evalue=8e-24,
Organism=Saccharomyces cerevisiae, GI6325345, Length=209, Percent_Identity=35.8851674641148, Blast_Score=139, Evalue=1e-33,
Organism=Drosophila melanogaster, GI17647949, Length=276, Percent_Identity=32.9710144927536, Blast_Score=137, Evalue=2e-32,
Organism=Drosophila melanogaster, GI24641198, Length=221, Percent_Identity=30.316742081448, Blast_Score=91, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004390
- InterPro:   IPR003593
- InterPro:   IPR000897
- InterPro:   IPR013822 [H]

Pfam domain/function: PF00448 SRP54; PF02881 SRP54_N [H]

EC number: NA

Molecular weight: Translated: 53542; Mature: 53411

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: PS00300 SRP54

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFDWFRRRYTDSTDSSGEAEPSPPAPEPAEISPEDYLAFAKAAYANLKARTAAQAPPAT
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
QDSVPPAPAEGIPAESVQPQPPASTEDSGPLAQAEPREPVQSSTPTQEPASPESPPVQPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPSFFDLAPRAAERLQALQASAVDEPKPEPVTPAVAPSPETGPEELVFDEGFRWSAEIL
CCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
AAQGRKPEEISVEEISWLQKLRRGLGKTRLNLINQLKALVGRGPLDQKAVEEIEALLLQA
HHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DVGIDATEQIIQALQKRMREEVVPPEEAVKYLKQQMRQMLTVGNPTFAPQRDTLNIWLIV
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
GVNGAGKTTTIGKIAHVARKSGYRCLIAAADTFRAAAVEQLKVWAERAGVEVIANPSPNA
EECCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
DPAAVVFDAITAAKARGTELLLVDTAGRLQNKKNLMDELAKIRRIVDKKAPEAKVESLLV
CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE
LDATQGQNGLRQAEVFAEAAKLSGVILTKLDSTAKGGIALAITQQMNLPIRFIGAGEGLE
EECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCHH
DLRPFSSYEFVEALLSEY
HCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
AFDWFRRRYTDSTDSSGEAEPSPPAPEPAEISPEDYLAFAKAAYANLKARTAAQAPPAT
CHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
QDSVPPAPAEGIPAESVQPQPPASTEDSGPLAQAEPREPVQSSTPTQEPASPESPPVQPA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AAPSFFDLAPRAAERLQALQASAVDEPKPEPVTPAVAPSPETGPEELVFDEGFRWSAEIL
CCCCHHHHCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHH
AAQGRKPEEISVEEISWLQKLRRGLGKTRLNLINQLKALVGRGPLDQKAVEEIEALLLQA
HHCCCCCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH
DVGIDATEQIIQALQKRMREEVVPPEEAVKYLKQQMRQMLTVGNPTFAPQRDTLNIWLIV
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEE
GVNGAGKTTTIGKIAHVARKSGYRCLIAAADTFRAAAVEQLKVWAERAGVEVIANPSPNA
EECCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHCCEEEEECCCCCC
DPAAVVFDAITAAKARGTELLLVDTAGRLQNKKNLMDELAKIRRIVDKKAPEAKVESLLV
CHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHEEEE
LDATQGQNGLRQAEVFAEAAKLSGVILTKLDSTAKGGIALAITQQMNLPIRFIGAGEGLE
EECCCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEEEEECCCCCEEEEECCCCHH
DLRPFSSYEFVEALLSEY
HCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]