Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607812

Identifier: 86607812

GI number: 86607812

Start: 328628

End: 329455

Strand: Reverse

Name: 86607812

Synonym: CYB_0313

Alternate gene names: NA

Gene position: 329455-328628 (Counterclockwise)

Preceding gene: 86607813

Following gene: 86607811

Centisome position: 10.81

GC content: 60.02

Gene sequence:

>828_bases
ATGGAGATCCTGGCGGTTCTCTTGGGGCTGTTGGCGGGCTTGGGAGGAGGAGCGGGCTATCTGGCGGATCAGACGGCGCG
GCAGCTTCTGTTGGATCAGTTGGATCGGGCAGAGGTTTTGGAGGTGCGCATCCAAAGCCAGCCCAATTACCGGCTGCTGA
ATGGCCAAGCGGATCGCCTGCTGATCGCCGGTCGCGGGCTCTATCGAGCGCCCTTTCCCCGCATCGAGCTTCTGGAGCTG
GAAACTGATCCGGTGGCAATTGACCCCTCTTTTTTCCAGGGGGCTCCCTTGCGCCTGGCGCGACCTCTGCAAGCGGCGGT
ACGGGTGTTGGTGCGGGAAGAGGACTTGAATGCTGCCCTCAACAAGCCGGAGGTGCTCCGCCAGTTTCAGGATATCCGCG
CCGATCTGCCTTTTGGGGGAGCTGGAAGGGAAGCTCGCCGTTTTGATCTGCGTCAGCCCCGCGTCGAGTTTTTGGATCCC
AGCCGCATTCAGCTCTCTGCCCTCTTGGTGGAGAAAGACGGCGGTACTGAGCAAAAGGACTCCGTCCCGCTAACGCGAGC
GGTGGAGGTGGTGTTTAACACCGGGATCCGCGTGGAAGAAGGGCGCAGCCTAAAGCTGGAGAATCCGGAGTTTGTGATCG
GTTCTGTGCGGGTTCCCGATGAGATCTCAGCAGCGTTTTTGGGCGGGCTCAATGAGGTGCTTGACCTGCAAGAGCTGGAA
GAGATTGGGATCCTGATGCGGGTGCTCAGCCTAGAGATAGAGCCTGACCAGTTGCAGGTGATTGGGTTTGTGCGGGTGGA
AGGGTTGGAAAGGACCTCGTCCCGCTAA

Upstream 100 bases:

>100_bases
TTGAGGCCAGCCCCCTCAAGGTGCTGCGCTAGCCCAGATCCCCAAGGGGGGCCAGGGATCCCCTTGCTAACCTAGGTTAG
GGCACAGCAGGGCAGTGAGC

Downstream 100 bases:

>100_bases
CGGGGATCCCCATTGAGCAGGGATGAGCTCCCCAGGGCTGCGCTCTAGCAGGAGAGCTGCTCTGTCAAACTGGATAAAGA
TCAGCCAGGCTGGAGATGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MEILAVLLGLLAGLGGGAGYLADQTARQLLLDQLDRAEVLEVRIQSQPNYRLLNGQADRLLIAGRGLYRAPFPRIELLEL
ETDPVAIDPSFFQGAPLRLARPLQAAVRVLVREEDLNAALNKPEVLRQFQDIRADLPFGGAGREARRFDLRQPRVEFLDP
SRIQLSALLVEKDGGTEQKDSVPLTRAVEVVFNTGIRVEEGRSLKLENPEFVIGSVRVPDEISAAFLGGLNEVLDLQELE
EIGILMRVLSLEIEPDQLQVIGFVRVEGLERTSSR

Sequences:

>Translated_275_residues
MEILAVLLGLLAGLGGGAGYLADQTARQLLLDQLDRAEVLEVRIQSQPNYRLLNGQADRLLIAGRGLYRAPFPRIELLEL
ETDPVAIDPSFFQGAPLRLARPLQAAVRVLVREEDLNAALNKPEVLRQFQDIRADLPFGGAGREARRFDLRQPRVEFLDP
SRIQLSALLVEKDGGTEQKDSVPLTRAVEVVFNTGIRVEEGRSLKLENPEFVIGSVRVPDEISAAFLGGLNEVLDLQELE
EIGILMRVLSLEIEPDQLQVIGFVRVEGLERTSSR
>Mature_275_residues
MEILAVLLGLLAGLGGGAGYLADQTARQLLLDQLDRAEVLEVRIQSQPNYRLLNGQADRLLIAGRGLYRAPFPRIELLEL
ETDPVAIDPSFFQGAPLRLARPLQAAVRVLVREEDLNAALNKPEVLRQFQDIRADLPFGGAGREARRFDLRQPRVEFLDP
SRIQLSALLVEKDGGTEQKDSVPLTRAVEVVFNTGIRVEEGRSLKLENPEFVIGSVRVPDEISAAFLGGLNEVLDLQELE
EIGILMRVLSLEIEPDQLQVIGFVRVEGLERTSSR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30490; Mature: 30490

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEILAVLLGLLAGLGGGAGYLADQTARQLLLDQLDRAEVLEVRIQSQPNYRLLNGQADRL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEECCCCCEE
LIAGRGLYRAPFPRIELLELETDPVAIDPSFFQGAPLRLARPLQAAVRVLVREEDLNAAL
EEECCCCCCCCCCCEEEEEECCCCEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NKPEVLRQFQDIRADLPFGGAGREARRFDLRQPRVEFLDPSRIQLSALLVEKDGGTEQKD
CCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCC
SVPLTRAVEVVFNTGIRVEEGRSLKLENPEFVIGSVRVPDEISAAFLGGLNEVLDLQELE
CCCHHHHHHHHHHCCCEEECCCEEEECCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHH
EIGILMRVLSLEIEPDQLQVIGFVRVEGLERTSSR
HHHHHHHHHHCCCCCCCEEEEEEEEECCCHHCCCC
>Mature Secondary Structure
MEILAVLLGLLAGLGGGAGYLADQTARQLLLDQLDRAEVLEVRIQSQPNYRLLNGQADRL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHEEEEEECCCCCEEEECCCCCEE
LIAGRGLYRAPFPRIELLELETDPVAIDPSFFQGAPLRLARPLQAAVRVLVREEDLNAAL
EEECCCCCCCCCCCEEEEEECCCCEEECCHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
NKPEVLRQFQDIRADLPFGGAGREARRFDLRQPRVEFLDPSRIQLSALLVEKDGGTEQKD
CCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCCCCHHHCCCCCEEEEEEEEECCCCCCCCC
SVPLTRAVEVVFNTGIRVEEGRSLKLENPEFVIGSVRVPDEISAAFLGGLNEVLDLQELE
CCCHHHHHHHHHHCCCEEECCCEEEECCCCEEEEEECCCHHHHHHHHCCHHHHHHHHHHH
EIGILMRVLSLEIEPDQLQVIGFVRVEGLERTSSR
HHHHHHHHHHCCCCCCCEEEEEEEEECCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA