| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is hisC
Identifier: 86607759
GI number: 86607759
Start: 275061
End: 276122
Strand: Reverse
Name: hisC
Synonym: CYB_0260
Alternate gene names: 86607759
Gene position: 276122-275061 (Counterclockwise)
Preceding gene: 86607760
Following gene: 86607754
Centisome position: 9.06
GC content: 62.62
Gene sequence:
>1062_bases ATGTGTGCCTTGCAGTATCTGCGCCCCGACTTGCTCTACCTCAAGCCCTACGACGCTGTGCCAGCCCCGGCTGCCGACAA GCTGGATGCCAATGAGTTCCCCCTCGATTGGCCGGCGGGCTTCAAGCAGAAGCTCTCCCTCCTTTGGGAAAAGGGGATCC CCAGCAACCGCTATCCCGATGCCCACCACCGGGGCCTGAAGCAGGCCATCGCCGCCTATGCCGGAGCGGAGCCAGAGCAG ATCAGCCTGGGCAATGGGTCGGATGAGCTGATTCGCTCGCTGCTGATTGCCACTTGTTTGGGCGGGCGGGGCGGTATTTT GGTGGCAGAGCCCACCTTCTCCATGTACGCCATCCTGGCCCAGAGCCTGGGGATCCCAGTGGTGCGGGTTCCCCGCGACC CGGAGACGTTTGCTCTGGATCTAGAGCGATGTCAACAGGCTTTGAGGGAGCATCCGATTCGGGTGGTGTGCCTGGTGGAT CCCAACTCGCCGACGGGGAATGGCCTGACGGCTGCAGAGTGGGAGTGGGTGGAAGGGCTGCCCGAAGAGATTCTGGTGAT TTTGGATGAGGCCTATTTTGAGTTCAGCCGGCACACAGCCCTGCCCAAATTGGCGGAGCATCCCAACTGGGTAATCTTGC GCACCTTCTCCAAAGCCTTTCGCCTGGCGGCCCACCGGGTGGGCTATGCTGTGGGTCATCCACAGCTTATGCAAGTGCTG GATGGGATCCGCCTGCCCTACAACCTCACGGCCCTTTCTCAGTGGGCGGTTCAGATGGCTTTGGAGCATGCCGAGGAGCT TTTGGCCGACGTGACGCTAATTTGTCAGGAGCGGGAAGCCCTTTACCAAGCTCTGCAGGAGCTGCCGGGGGTGCGGGTGT GGCCCAGCCAAGCCAACTTCCTCTACTTCCGGGTGGCCGGCTGGGATCCCCAAGAGCTGCAGCGGGCCTGGCAGGAGCTG GGGACTGGTGTGCGCTACACGGGTGGGGGGCTGCGTCTGACGGTGGGCACCCCTGAAGAGAACCGACGGGCCTTGGAGCG CCTGCGCCAAATCCTGCAATAG
Upstream 100 bases:
>100_bases GATTGCCCTTTTTGAGGCGCTACGTCAGCAGGGATCCCTGACCAAAGAATAGGGGGTCGGGTTGACCCTGTTATGATAGG TGTTTCGCCCCGTCAGGAAG
Downstream 100 bases:
>100_bases GCCTCCCGGCCTGCGTTCGGAGCCAGCCTAGGTGGATGGGTCGGCGCGCGAAAAGCGCTGGATCAAGCTGTGCACCTGCT GCAAGTGTCGTTCGTCCAGA
Product: histidinol-phosphate aminotransferase
Products: NA
Alternate protein names: Imidazole acetol-phosphate transaminase
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MCALQYLRPDLLYLKPYDAVPAPAADKLDANEFPLDWPAGFKQKLSLLWEKGIPSNRYPDAHHRGLKQAIAAYAGAEPEQ ISLGNGSDELIRSLLIATCLGGRGGILVAEPTFSMYAILAQSLGIPVVRVPRDPETFALDLERCQQALREHPIRVVCLVD PNSPTGNGLTAAEWEWVEGLPEEILVILDEAYFEFSRHTALPKLAEHPNWVILRTFSKAFRLAAHRVGYAVGHPQLMQVL DGIRLPYNLTALSQWAVQMALEHAEELLADVTLICQEREALYQALQELPGVRVWPSQANFLYFRVAGWDPQELQRAWQEL GTGVRYTGGGLRLTVGTPEENRRALERLRQILQ
Sequences:
>Translated_353_residues MCALQYLRPDLLYLKPYDAVPAPAADKLDANEFPLDWPAGFKQKLSLLWEKGIPSNRYPDAHHRGLKQAIAAYAGAEPEQ ISLGNGSDELIRSLLIATCLGGRGGILVAEPTFSMYAILAQSLGIPVVRVPRDPETFALDLERCQQALREHPIRVVCLVD PNSPTGNGLTAAEWEWVEGLPEEILVILDEAYFEFSRHTALPKLAEHPNWVILRTFSKAFRLAAHRVGYAVGHPQLMQVL DGIRLPYNLTALSQWAVQMALEHAEELLADVTLICQEREALYQALQELPGVRVWPSQANFLYFRVAGWDPQELQRAWQEL GTGVRYTGGGLRLTVGTPEENRRALERLRQILQ >Mature_353_residues MCALQYLRPDLLYLKPYDAVPAPAADKLDANEFPLDWPAGFKQKLSLLWEKGIPSNRYPDAHHRGLKQAIAAYAGAEPEQ ISLGNGSDELIRSLLIATCLGGRGGILVAEPTFSMYAILAQSLGIPVVRVPRDPETFALDLERCQQALREHPIRVVCLVD PNSPTGNGLTAAEWEWVEGLPEEILVILDEAYFEFSRHTALPKLAEHPNWVILRTFSKAFRLAAHRVGYAVGHPQLMQVL DGIRLPYNLTALSQWAVQMALEHAEELLADVTLICQEREALYQALQELPGVRVWPSQANFLYFRVAGWDPQELQRAWQEL GTGVRYTGGGLRLTVGTPEENRRALERLRQILQ
Specific function: Histidine biosynthesis; seventh step. [C]
COG id: COG0079
COG function: function code E; Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily
Homologues:
Organism=Escherichia coli, GI1788332, Length=335, Percent_Identity=32.2388059701493, Blast_Score=146, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322075, Length=327, Percent_Identity=31.4984709480122, Blast_Score=147, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): HIS8_SYNJB (Q2JPM4)
Other databases:
- EMBL: CP000240 - RefSeq: YP_476521.1 - ProteinModelPortal: Q2JPM4 - SMR: Q2JPM4 - STRING: Q2JPM4 - GeneID: 3902204 - GenomeReviews: CP000240_GR - KEGG: cyb:CYB_0260 - TIGR: CYB_0260 - eggNOG: COG0079 - HOGENOM: HBG646350 - OMA: MDEAYQP - PhylomeDB: Q2JPM4 - ProtClustDB: PRK02610 - BioCyc: SSP321332:CYB_0260-MONOMER - HAMAP: MF_01023 - InterPro: IPR004839 - InterPro: IPR005861 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 - Gene3D: G3DSA:3.40.640.10 - Gene3D: G3DSA:3.90.1150.10 - TIGRFAMs: TIGR01141
Pfam domain/function: PF00155 Aminotran_1_2; SSF53383 PyrdxlP-dep_Trfase_major
EC number: =2.6.1.9
Molecular weight: Translated: 39544; Mature: 39544
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: PS00599 AA_TRANSFER_CLASS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCALQYLRPDLLYLKPYDAVPAPAADKLDANEFPLDWPAGFKQKLSLLWEKGIPSNRYPD CCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC AHHRGLKQAIAAYAGAEPEQISLGNGSDELIRSLLIATCLGGRGGILVAEPTFSMYAILA HHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH QSLGIPVVRVPRDPETFALDLERCQQALREHPIRVVCLVDPNSPTGNGLTAAEWEWVEGL HHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHCC PEEILVILDEAYFEFSRHTALPKLAEHPNWVILRTFSKAFRLAAHRVGYAVGHPQLMQVL CHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHH DGIRLPYNLTALSQWAVQMALEHAEELLADVTLICQEREALYQALQELPGVRVWPSQANF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCE LYFRVAGWDPQELQRAWQELGTGVRYTGGGLRLTVGTPEENRRALERLRQILQ EEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHC >Mature Secondary Structure MCALQYLRPDLLYLKPYDAVPAPAADKLDANEFPLDWPAGFKQKLSLLWEKGIPSNRYPD CCCHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCC AHHRGLKQAIAAYAGAEPEQISLGNGSDELIRSLLIATCLGGRGGILVAEPTFSMYAILA HHHHHHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHH QSLGIPVVRVPRDPETFALDLERCQQALREHPIRVVCLVDPNSPTGNGLTAAEWEWVEGL HHCCCCEEECCCCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHHCC PEEILVILDEAYFEFSRHTALPKLAEHPNWVILRTFSKAFRLAAHRVGYAVGHPQLMQVL CHHHHHHHHHHHHHHHHHHCCCHHHCCCCEEEEHHHHHHHHHHHHHHHHHCCCHHHHHHH DGIRLPYNLTALSQWAVQMALEHAEELLADVTLICQEREALYQALQELPGVRVWPSQANF CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCE LYFRVAGWDPQELQRAWQELGTGVRYTGGGLRLTVGTPEENRRALERLRQILQ EEEEECCCCHHHHHHHHHHHCCCCEEECCCEEEEECCCHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA