| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607743
Identifier: 86607743
GI number: 86607743
Start: 256447
End: 256857
Strand: Reverse
Name: 86607743
Synonym: CYB_0244
Alternate gene names: NA
Gene position: 256857-256447 (Counterclockwise)
Preceding gene: 86607744
Following gene: 86607742
Centisome position: 8.43
GC content: 57.42
Gene sequence:
>411_bases ATGATCATGACTGTTTGTAGCGCTGCGGATCTGGTCAGCCAGTATGCCTCAGGACGGCGCGATTTTCGGGAGATCGATTT GCAGGGGGCTGAGCTGCAGGGGATCCATTTGGCTGGCGCCGATCTCAGCTATGCCGATTTCAGTGGGGCCAACTTGGCGG GGGCTAATTTGCGGGGGTGCGATCTCAGTTTTGCCGACTTCAGCGGAGCTAACCTATCGGAAGCCGATTTGCGGGGATGT CTCCTCTTTGGCAGCAATTTCCGAGGGGCGCTCTTAGAAGGAGCCTTGTTGGATCACGCAGATTTCGATGCCTATACCCA TTTCCCGAAGGATTTCGATCCCAAGGCCCACCGCCTGCACGGCATCACGGTGGATACCTCCGTGCCTAGCCCACACGACC CATCGGTCTGA
Upstream 100 bases:
>100_bases GTTCCATCAACACTGCTAAAAGACCAGCCTGGGGATCCCTGAAGTCCGCCCATACCGGGGTCGATGGAAGGGATCCCCCA TCGATAACCGAGGAGGCCCG
Downstream 100 bases:
>100_bases GCTGGGTGGGATCCCCAAGCTGCCCTTTCGGCTTTTTATCCCCCTTTCTCCCTTCCAGCCAGGATAGCAGCGGTCTAGCT AAAAGACCCTAGGGATCTAA
Product: pentapeptide repeat-containing protein
Products: NA
Alternate protein names: Pentapeptide Repeat Protein; RfrA Pentapeptide Repeat-Containing Protein; Pentapeptide Repeat Family Protein; Serine/Threonine Protein Kinase
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGCDLSFADFSGANLSEADLRGC LLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLHGITVDTSVPSPHDPSV
Sequences:
>Translated_136_residues MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGCDLSFADFSGANLSEADLRGC LLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLHGITVDTSVPSPHDPSV >Mature_136_residues MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGCDLSFADFSGANLSEADLRGC LLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLHGITVDTSVPSPHDPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14488; Mature: 14488
Theoretical pI: Translated: 4.53; Mature: 4.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGC CEEEECHHHHHHHHHHCCCCCHHHHCCCCCEECEEEEECCCCCCCCCCCCCCCCCCCCCC DLSFADFSGANLSEADLRGCLLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLH CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE GITVDTSVPSPHDPSV EEEEECCCCCCCCCCC >Mature Secondary Structure MIMTVCSAADLVSQYASGRRDFREIDLQGAELQGIHLAGADLSYADFSGANLAGANLRGC CEEEECHHHHHHHHHHCCCCCHHHHCCCCCEECEEEEECCCCCCCCCCCCCCCCCCCCCC DLSFADFSGANLSEADLRGCLLFGSNFRGALLEGALLDHADFDAYTHFPKDFDPKAHRLH CCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEE GITVDTSVPSPHDPSV EEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA