| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607692
Identifier: 86607692
GI number: 86607692
Start: 204872
End: 205585
Strand: Direct
Name: 86607692
Synonym: CYB_0191
Alternate gene names: NA
Gene position: 204872-205585 (Clockwise)
Preceding gene: 86607691
Following gene: 86607693
Centisome position: 6.72
GC content: 59.38
Gene sequence:
>714_bases TTGGAGAACCGGATCGCCTTGGCGGAGTTCCGGGTGGGCGTGGATGCGGTCATTTTCTCCATCGACACTGAGCAGAATCG CCTCCTGGTGCTGCTGGTGCGGCGGCGGGAGGATCCCTTCCGCGGTTGCTGGGCCCTGCCAGGAACACTGGTGCGGCGCT CAGAATCCCTAGAAGCAGCGGCCTACCGCATCTTGGCCGAGAAGATTCGTGTTAGGAACCTCTATCTGGAGCAGCTCTAC ACCTTTGGGGGGCCGGAACGGGATCCCCGCGAGGCCGAGGATGGCTATGGAGTGCGCTACCTGTCGGTCAGCTACTTTGC CCTGGTGCGGTTCCAGGATGCTGAATTGCTGGCAGACGGAGTGGAGGGCATTGCCTGGTATCCCGCCGACCAGATTCCCC CCTTGGCCTTTGACCACGAAGAGATTTGCCGCTATGCCCGCCGTCGCCTCTGCGCCAAGTTGGAGTACAGCCCGATTGCC TTTGACATTTTGCCCGCCACCTTCACGCTAGGGGAGGTCTATCAGCTCTACGGCACCGTTTTGGGCGAGGGGTTCTCCGA CTACTCCAATTTTCGCGCCCGCCTACTGAAACTGGGTATCTTGCAAGATACCGGCCAGAAAAGTTCCCAAGGAACAGGCA GACCGGCAACCCTCTACCGTTTTGATGCGGCTGCTTTCGAGAAAATCCGTCATAAGCCGATGGTGTTTGTCTGA
Upstream 100 bases:
>100_bases GCGATCGCTTCTTTCCTGAACCATGTTCAGGAGAGTTCAGCGTGAATGTATCAGGATTCAGTGCCAAGCTATGCAGGGAT CCCGCATCGTGGCAGGCCCA
Downstream 100 bases:
>100_bases AGGCCGTCTGAGGGATCCCGGCTCGCCAAGGCCAAGCTGGCCAGATCGGTTGGTATAGATTGGCTTTTATTCAAAGGGAG TTCCATTACATGACCACCTA
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: DNA Hydrolase; NUDIX Family Hydrolase; ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; Hydrolase NUDIX Family Protein; Hydrolase; DNA Hydrolase With MutT Domain-Containing Protein; Hydrolase MutT/Nudix Family Protein; NUDIX Domain-Containing Protein; Phosphohydrolase; MutT/NUDIX Family DNA Hydrolase; MutT/Nudix Family DNA Hydrolase; Nudix Hydrolase Family Protein; NTP Pyrophosphohydrolase; Hydrolase Nudix Family; Nudix Superfamily Hydrolase; Protein Containing NUDIX Domain; DNA Hydrolase Protein MutT/Nudix Family; Acetohydroxy Acid Isomeroreductase
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MENRIALAEFRVGVDAVIFSIDTEQNRLLVLLVRRREDPFRGCWALPGTLVRRSESLEAAAYRILAEKIRVRNLYLEQLY TFGGPERDPREAEDGYGVRYLSVSYFALVRFQDAELLADGVEGIAWYPADQIPPLAFDHEEICRYARRRLCAKLEYSPIA FDILPATFTLGEVYQLYGTVLGEGFSDYSNFRARLLKLGILQDTGQKSSQGTGRPATLYRFDAAAFEKIRHKPMVFV
Sequences:
>Translated_237_residues MENRIALAEFRVGVDAVIFSIDTEQNRLLVLLVRRREDPFRGCWALPGTLVRRSESLEAAAYRILAEKIRVRNLYLEQLY TFGGPERDPREAEDGYGVRYLSVSYFALVRFQDAELLADGVEGIAWYPADQIPPLAFDHEEICRYARRRLCAKLEYSPIA FDILPATFTLGEVYQLYGTVLGEGFSDYSNFRARLLKLGILQDTGQKSSQGTGRPATLYRFDAAAFEKIRHKPMVFV >Mature_237_residues MENRIALAEFRVGVDAVIFSIDTEQNRLLVLLVRRREDPFRGCWALPGTLVRRSESLEAAAYRILAEKIRVRNLYLEQLY TFGGPERDPREAEDGYGVRYLSVSYFALVRFQDAELLADGVEGIAWYPADQIPPLAFDHEEICRYARRRLCAKLEYSPIA FDILPATFTLGEVYQLYGTVLGEGFSDYSNFRARLLKLGILQDTGQKSSQGTGRPATLYRFDAAAFEKIRHKPMVFV
Specific function: Unknown
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27061; Mature: 27061
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENRIALAEFRVGVDAVIFSIDTEQNRLLVLLVRRREDPFRGCWALPGTLVRRSESLEAA CCCCEEHHHHHCCEEEEEEEECCCCCCEEEEEEECCCCCCCCHHCCCHHHHHCCHHHHHH AYRILAEKIRVRNLYLEQLYTFGGPERDPREAEDGYGVRYLSVSYFALVRFQDAELLADG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHC VEGIAWYPADQIPPLAFDHEEICRYARRRLCAKLEYSPIAFDILPATFTLGEVYQLYGTV CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH LGEGFSDYSNFRARLLKLGILQDTGQKSSQGTGRPATLYRFDAAAFEKIRHKPMVFV HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCC >Mature Secondary Structure MENRIALAEFRVGVDAVIFSIDTEQNRLLVLLVRRREDPFRGCWALPGTLVRRSESLEAA CCCCEEHHHHHCCEEEEEEEECCCCCCEEEEEEECCCCCCCCHHCCCHHHHHCCHHHHHH AYRILAEKIRVRNLYLEQLYTFGGPERDPREAEDGYGVRYLSVSYFALVRFQDAELLADG HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEEEEEECCHHHHHHC VEGIAWYPADQIPPLAFDHEEICRYARRRLCAKLEYSPIAFDILPATFTLGEVYQLYGTV CCCEEECCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHH LGEGFSDYSNFRARLLKLGILQDTGQKSSQGTGRPATLYRFDAAAFEKIRHKPMVFV HCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEECHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA