Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is 86607635

Identifier: 86607635

GI number: 86607635

Start: 145666

End: 146820

Strand: Direct

Name: 86607635

Synonym: CYB_0133

Alternate gene names: NA

Gene position: 145666-146820 (Clockwise)

Preceding gene: 86607632

Following gene: 86607639

Centisome position: 4.78

GC content: 60.26

Gene sequence:

>1155_bases
ATGGAGAGAACCCTAGACCAGATTAACCAACGCATTGCCAAAGGCCAGGTGCGGGTGTGGACGGCCCTGGAAGCCAAAGC
CAAGCTGGCCACCTTGGGGATCCAGGAAGCCTTTGAGCAGGTGGATGTGATCACCACCGGCACCTTTGAGCCAATGGAGT
CTTCAGGAGCCATTGTGAACCTGGGCCATACGGATCCGCCCATCAAGATTCGCCAAGCTTGGCTGAACGGGGTACCGGCC
TATGCCGGATTTGGCGCGGTGGATCTTTACCTGGGGGCAGCCCAACCCAGCGAGCAAGCGGATCAAGCCTATGGGGGCGG
CCATGTCATTGCCGACCTGGTGGCGGGCAAGCGCGTCCATTTGCGGGCCATCGGCCAAGTGACCGATTGTTACCCCCGCG
CCGACTACGAGACCACCCTGACTCGGGATCAGCTCAACCAGTTTTACCTGTTCAACCCCCGCAATGCCTACCAAAACTTC
ATCGTCGGGGTGAACGGCGGGGATCGGCCTTTGTACACCTACTTGGGTCTGTTGGAACCGCATCTGGGCAATGCCGTCTA
TTCCAACCCGGGAGAGCTATCCCCCTTGTTGAACGATCCCCTGTTGCGCCGGGTGGGGATCGGCAGCCGCATCTTTTTGG
GAGGCGGCATCGGCTACGTCGCCTGGGAGGGCACCCAACACTTTCCGCTGCAAAAGCGATTGCCCAACCAAACTCCCATC
GGCCCGGCGGCCACTCTAGCCCTGATTGGAGATGCCAAGCAAATGCAGGCGGAATGGGTGAGGGGCTGCTACTTCCGCAA
CTACGGTCCCAGCTTGATGTTGGGGGTCGGGATCCCCATTCCCATCCTCGCTCCTGCGGATTTGGAGGCCATCGCCATCC
GGGATGAAGAACTGGTGGCACCGGTGATCGACTTTTCCATTCCCCGCCGGGTGCGGCCCACCTTTGGCTTGGTGAGCTAT
GCCCAGCTCAAATCCGGCCAGATCACCCTCAATGGCCGCAAGGTTCGCACCGCTCCCCTGGTCAGCCTGCGCCGCTCCAT
GCAAATTGCCGAAATCCTCAAGCAATGGATAGAAAGCGGCCAATTTACCCTCACCCAACCTGTCGCCCCCCTGCCCCTGG
ATCGGGAGTTTCTCCCCCAAAACCCTCTCAGGTGA

Upstream 100 bases:

>100_bases
AGAATTCAAGATGGGAGCGGATCCCTCGACGATCAAGCGATCAAGACTGCCTAGTGCTCCACACCGCCAACGCGACCAAC
CATTGCGATCTTTACATCCC

Downstream 100 bases:

>100_bases
CGTCCTGATACATTTACGCTGAACACTGCTGAACATCACTGTTCAACTATGCAGCGATAGCATTCTGTTTGTTTCCAAAC
AGAATGGCGGTATCCCGCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 384

Protein sequence:

>384_residues
MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVNLGHTDPPIKIRQAWLNGVPA
YAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVHLRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNF
IVGVNGGDRPLYTYLGLLEPHLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI
GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVAPVIDFSIPRRVRPTFGLVSY
AQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESGQFTLTQPVAPLPLDREFLPQNPLR

Sequences:

>Translated_384_residues
MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVNLGHTDPPIKIRQAWLNGVPA
YAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVHLRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNF
IVGVNGGDRPLYTYLGLLEPHLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI
GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVAPVIDFSIPRRVRPTFGLVSY
AQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESGQFTLTQPVAPLPLDREFLPQNPLR
>Mature_384_residues
MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVNLGHTDPPIKIRQAWLNGVPA
YAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVHLRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNF
IVGVNGGDRPLYTYLGLLEPHLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI
GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVAPVIDFSIPRRVRPTFGLVSY
AQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESGQFTLTQPVAPLPLDREFLPQNPLR

Specific function: Unknown

COG id: COG1900

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR002708
- InterPro:   IPR016426
- ProDom:   PD011569 [H]

Pfam domain/function: PF00571 CBS; PF01837 DUF39 [H]

EC number: NA

Molecular weight: Translated: 42158; Mature: 42158

Theoretical pI: Translated: 8.58; Mature: 8.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVN
CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE
LGHTDPPIKIRQAWLNGVPAYAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVH
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCEEE
LRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNFIVGVNGGDRPLYTYLGLLEP
EEECCCHHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCC
HLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI
CCCCCEECCCCCCCHHHCCHHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHCCCCCCC
GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVA
CHHHHEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCEEEEECCHHHHH
PVIDFSIPRRVRPTFGLVSYAQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESG
HHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
QFTLTQPVAPLPLDREFLPQNPLR
CEEEECCCCCCCCCHHHCCCCCCC
>Mature Secondary Structure
MERTLDQINQRIAKGQVRVWTALEAKAKLATLGIQEAFEQVDVITTGTFEPMESSGAIVN
CCCHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCEEE
LGHTDPPIKIRQAWLNGVPAYAGFGAVDLYLGAAQPSEQADQAYGGGHVIADLVAGKRVH
CCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHCCCCHHHHHHHCCCEEE
LRAIGQVTDCYPRADYETTLTRDQLNQFYLFNPRNAYQNFIVGVNGGDRPLYTYLGLLEP
EEECCCHHHCCCCCCCCHHHHHHHCCEEEEECCCCCCCCEEEECCCCCCHHHHHHHHHCC
HLGNAVYSNPGELSPLLNDPLLRRVGIGSRIFLGGGIGYVAWEGTQHFPLQKRLPNQTPI
CCCCCEECCCCCCCHHHCCHHHHHHCCCCEEEEECCEEEEEECCCCCCCHHHHCCCCCCC
GPAATLALIGDAKQMQAEWVRGCYFRNYGPSLMLGVGIPIPILAPADLEAIAIRDEELVA
CHHHHEEEECCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEECCCCCEEEEECCHHHHH
PVIDFSIPRRVRPTFGLVSYAQLKSGQITLNGRKVRTAPLVSLRRSMQIAEILKQWIESG
HHHCCCCCCCCCCCHHHHHHHHCCCCEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHCC
QFTLTQPVAPLPLDREFLPQNPLR
CEEEECCCCCCCCCHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]