Definition Synechococcus sp. JA-2-3B'a(2-13), complete genome.
Accession NC_007776
Length 3,046,682

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The map label for this gene is icc [H]

Identifier: 86607632

GI number: 86607632

Start: 142995

End: 143789

Strand: Direct

Name: icc [H]

Synonym: CYB_0131

Alternate gene names: 86607632

Gene position: 142995-143789 (Clockwise)

Preceding gene: 86607631

Following gene: 86607635

Centisome position: 4.69

GC content: 57.25

Gene sequence:

>795_bases
ATGACCGTATACGTGGTTCAGATCAGCGACCTGCATCTGTTTGCCAAGCCCCATCACCGGCTGCTGGGGGTGGACACGGA
AGCCTCTTTCCTGCAGGTGCAAAAGGCCATTGCCGCTCTGGATCCCTTGCCGGATCTGCTGCTGCTTACCGGAGATCTCT
CTCAAGATGGCAGTGCGGCATCTTACGCCCGTTTGAGAGCCCATTTGCAGGCTCTCCCCATCGATACTTACTGGTTGGCA
GGCAACCACGATCGCCTGCACACCATGAACCAAGAGCTYCAYGCCGAGCGGCTATTTGGGGACAAGAGCTTCAGCCGGGA
AAATTGGAGCTTTATTTTGTTGAACTCCCTCGTGCCCGGCAAAGATAGCGGTTACCTGACGGAGCGCACGCTGCTGTGGC
TGAGACAGGAATTGCAGCGGAGCAAAGCTGCCCAACACCATGTTTTGTTGGCCCTGCACCATCCCCCTTTTTCGGTGGAT
TCTGCCTGGCTGGATCAAAGTGCCCTGCAGCAGCCGGAGCGGTTGTTTGGGGTTCTGGACGAGTTCGACCACATCCGCCT
CGTTGTATTCGGCCATATTCACCAAGACCTGCACCGCCGGCGGGAGGGGGTTGATTACCTGGCTTGTCCCTCAACCTGTG
TGCAATTTCGTCCCAAGAGCCCCCAGTTTGGCCTGGAGGTAATTCCCCCTGCCCTGAGGCAGATATGGTTGGAGCGAGAT
GGCAGCTTCAAAACTCAGGTTCAACGGGTGGGAGCTGCTCTGCAACGGCCCAACCTGGCCCTGAAGGGATATTAG

Upstream 100 bases:

>100_bases
CCCTACCTACTGGTTCCAGCCGGGCCATCTGGTGTTAAAACGTAAAACGGTAGTGTTTTAAACCTGCGGAGATGGGATCC
CACCCTCTTGGGCCTGCTCT

Downstream 100 bases:

>100_bases
CTCTCCCCCTCTTGAACCTCTGTGGGGGGTAGCCCGATGGCCTGCCCCAAACAGACGCTGGCCCCCAGCAAGGCCAACCA
CCCCGGCAGCAGCGACAGGA

Product: icc protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MTVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAASYARLRAHLQALPIDTYWLA
GNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPGKDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVD
SAWLDQSALQQPERLFGVLDEFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD
GSFKTQVQRVGAALQRPNLALKGY

Sequences:

>Translated_264_residues
MTVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAASYARLRAHLQALPIDTYWLA
GNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPGKDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVD
SAWLDQSALQQPERLFGVLDEFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD
GSFKTQVQRVGAALQRPNLALKGY
>Mature_263_residues
TVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAASYARLRAHLQALPIDTYWLAG
NHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPGKDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVDS
AWLDQSALQQPERLFGVLDEFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERDG
SFKTQVQRVGAALQRPNLALKGY

Specific function: Affects The Expression Of The Lacz Gene. [C]

COG id: COG1409

COG function: function code R; Predicted phosphohydrolases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli icc [H]

Homologues:

Organism=Escherichia coli, GI1789410, Length=263, Percent_Identity=38.7832699619772, Blast_Score=157, Evalue=1e-39,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013622
- InterPro:   IPR004843
- ProDom:   PD587589 [H]

Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]

EC number: NA

Molecular weight: Translated: 30065; Mature: 29934

Theoretical pI: Translated: 7.53; Mature: 7.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAA
CEEEEEEEECEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
SYARLRAHLQALPIDTYWLAGNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPG
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
KDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVDSAWLDQSALQQPERLFGVLD
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCHHHHHCHHHHHHHHH
EFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD
CCCCEEEEEEHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCCCCCEECCHHHHHHHHHCC
GSFKTQVQRVGAALQRPNLALKGY
CCHHHHHHHHHHHHHCCCEEECCC
>Mature Secondary Structure 
TVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAA
EEEEEEEECEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH
SYARLRAHLQALPIDTYWLAGNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPG
HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC
KDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVDSAWLDQSALQQPERLFGVLD
CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCHHHHHCHHHHHHHHH
EFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD
CCCCEEEEEEHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCCCCCEECCHHHHHHHHHCC
GSFKTQVQRVGAALQRPNLALKGY
CCHHHHHHHHHHHHHCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]