| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is icc [H]
Identifier: 86607632
GI number: 86607632
Start: 142995
End: 143789
Strand: Direct
Name: icc [H]
Synonym: CYB_0131
Alternate gene names: 86607632
Gene position: 142995-143789 (Clockwise)
Preceding gene: 86607631
Following gene: 86607635
Centisome position: 4.69
GC content: 57.25
Gene sequence:
>795_bases ATGACCGTATACGTGGTTCAGATCAGCGACCTGCATCTGTTTGCCAAGCCCCATCACCGGCTGCTGGGGGTGGACACGGA AGCCTCTTTCCTGCAGGTGCAAAAGGCCATTGCCGCTCTGGATCCCTTGCCGGATCTGCTGCTGCTTACCGGAGATCTCT CTCAAGATGGCAGTGCGGCATCTTACGCCCGTTTGAGAGCCCATTTGCAGGCTCTCCCCATCGATACTTACTGGTTGGCA GGCAACCACGATCGCCTGCACACCATGAACCAAGAGCTYCAYGCCGAGCGGCTATTTGGGGACAAGAGCTTCAGCCGGGA AAATTGGAGCTTTATTTTGTTGAACTCCCTCGTGCCCGGCAAAGATAGCGGTTACCTGACGGAGCGCACGCTGCTGTGGC TGAGACAGGAATTGCAGCGGAGCAAAGCTGCCCAACACCATGTTTTGTTGGCCCTGCACCATCCCCCTTTTTCGGTGGAT TCTGCCTGGCTGGATCAAAGTGCCCTGCAGCAGCCGGAGCGGTTGTTTGGGGTTCTGGACGAGTTCGACCACATCCGCCT CGTTGTATTCGGCCATATTCACCAAGACCTGCACCGCCGGCGGGAGGGGGTTGATTACCTGGCTTGTCCCTCAACCTGTG TGCAATTTCGTCCCAAGAGCCCCCAGTTTGGCCTGGAGGTAATTCCCCCTGCCCTGAGGCAGATATGGTTGGAGCGAGAT GGCAGCTTCAAAACTCAGGTTCAACGGGTGGGAGCTGCTCTGCAACGGCCCAACCTGGCCCTGAAGGGATATTAG
Upstream 100 bases:
>100_bases CCCTACCTACTGGTTCCAGCCGGGCCATCTGGTGTTAAAACGTAAAACGGTAGTGTTTTAAACCTGCGGAGATGGGATCC CACCCTCTTGGGCCTGCTCT
Downstream 100 bases:
>100_bases CTCTCCCCCTCTTGAACCTCTGTGGGGGGTAGCCCGATGGCCTGCCCCAAACAGACGCTGGCCCCCAGCAAGGCCAACCA CCCCGGCAGCAGCGACAGGA
Product: icc protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MTVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAASYARLRAHLQALPIDTYWLA GNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPGKDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVD SAWLDQSALQQPERLFGVLDEFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD GSFKTQVQRVGAALQRPNLALKGY
Sequences:
>Translated_264_residues MTVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAASYARLRAHLQALPIDTYWLA GNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPGKDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVD SAWLDQSALQQPERLFGVLDEFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD GSFKTQVQRVGAALQRPNLALKGY >Mature_263_residues TVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAASYARLRAHLQALPIDTYWLAG NHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPGKDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVDS AWLDQSALQQPERLFGVLDEFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERDG SFKTQVQRVGAALQRPNLALKGY
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli icc [H]
Homologues:
Organism=Escherichia coli, GI1789410, Length=263, Percent_Identity=38.7832699619772, Blast_Score=157, Evalue=1e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013622 - InterPro: IPR004843 - ProDom: PD587589 [H]
Pfam domain/function: PF00149 Metallophos; PF08413 Metallophos_C [H]
EC number: NA
Molecular weight: Translated: 30065; Mature: 29934
Theoretical pI: Translated: 7.53; Mature: 7.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAA CEEEEEEEECEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH SYARLRAHLQALPIDTYWLAGNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPG HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC KDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVDSAWLDQSALQQPERLFGVLD CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCHHHHHCHHHHHHHHH EFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD CCCCEEEEEEHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCCCCCEECCHHHHHHHHHCC GSFKTQVQRVGAALQRPNLALKGY CCHHHHHHHHHHHHHCCCEEECCC >Mature Secondary Structure TVYVVQISDLHLFAKPHHRLLGVDTEASFLQVQKAIAALDPLPDLLLLTGDLSQDGSAA EEEEEEEECEEEEECCCCEEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHH SYARLRAHLQALPIDTYWLAGNHDRLHTMNQELHAERLFGDKSFSRENWSFILLNSLVPG HHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCC KDSGYLTERTLLWLRQELQRSKAAQHHVLLALHHPPFSVDSAWLDQSALQQPERLFGVLD CCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHCCHHHHHCHHHHHHHHH EFDHIRLVVFGHIHQDLHRRREGVDYLACPSTCVQFRPKSPQFGLEVIPPALRQIWLERD CCCCEEEEEEHHHHHHHHHHHCCCCEEECCHHHHHCCCCCCCCCCEECCHHHHHHHHHCC GSFKTQVQRVGAALQRPNLALKGY CCHHHHHHHHHHHHHCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]