| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607625
Identifier: 86607625
GI number: 86607625
Start: 135720
End: 136391
Strand: Direct
Name: 86607625
Synonym: CYB_0123
Alternate gene names: NA
Gene position: 135720-136391 (Clockwise)
Preceding gene: 86607623
Following gene: 86607626
Centisome position: 4.45
GC content: 56.85
Gene sequence:
>672_bases ATGTTGTTGGAGCTAACCCCAGAAGAATGCGAATCGGTGATTCCGGTGGTGCCAACGCGCCTTCAGTATGCGGCTTACTG GAGCGATGCCCTCAAGAGCACGGGCCGCATCATCACGGCCATTTTGGTGGGCGTGGCGCTGCTGGTTCTCTCTCGCGCTT TTGGCGAGGGATCCTTTCTGGGGGCGATCTCCTTTCTGGTCGGGATTCTCTCGTTGCTCTATCCCTTCCTGTGGGGGCCG CTCTATACCATCTCCCGCCGTCAGCTAGCCTTTCGCGAGATTCCCTATGGGGGATTGTTTTTTGGGCAGGTGTTGCGCAC TCGCCGCTACGAGGTGGTGGTGGAAGAGCGAGAAAAGCTGGATGAAGATGGCAACTTCTACATTGAAGAGGTGCGGGAGC GCCAGTTTGAGATGGAAATTGGCGATGAGACCGGAGTCGTCTATCGTGTGCGGGCCAAGGACGATCCCCGCTACAGGCGA ATTGTCAAAAAGCAATCGGTGCTCGGGTTGGTGAAAGCCTATTCCCGCGATTTGCAGCGCCGGCCCACCTTGAGCGAGGT CTATGTGGTCAAGCTGGGGGAGTGGGTGGGAGATGTCTCCTATCTGGATCGGGAGGCTTTTTTGGATATGGCAGATGAGC TGTTGGAGCTACAGGCCCAAGGACAAGCTTGA
Upstream 100 bases:
>100_bases TGGCAGCAGACAAGCCCGGCGGCGAAGCGCCCCTGCCTCATTTTAAGATAGGGTCTGGCCCGTTGCAGATGGAGTGTGGC ATTGTGAGGATCCTTGGAGC
Downstream 100 bases:
>100_bases TCCCCTGGATCCCTGGTGTTCTCTGGGATGGAGGGGAAGGGATCCCTGCCTTTTTATTCTGAAACCTAAACGGCTGCCTA TCCGGGAGCGCCGCTTTTAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 223; Mature: 223
Protein sequence:
>223_residues MLLELTPEECESVIPVVPTRLQYAAYWSDALKSTGRIITAILVGVALLVLSRAFGEGSFLGAISFLVGILSLLYPFLWGP LYTISRRQLAFREIPYGGLFFGQVLRTRRYEVVVEEREKLDEDGNFYIEEVRERQFEMEIGDETGVVYRVRAKDDPRYRR IVKKQSVLGLVKAYSRDLQRRPTLSEVYVVKLGEWVGDVSYLDREAFLDMADELLELQAQGQA
Sequences:
>Translated_223_residues MLLELTPEECESVIPVVPTRLQYAAYWSDALKSTGRIITAILVGVALLVLSRAFGEGSFLGAISFLVGILSLLYPFLWGP LYTISRRQLAFREIPYGGLFFGQVLRTRRYEVVVEEREKLDEDGNFYIEEVRERQFEMEIGDETGVVYRVRAKDDPRYRR IVKKQSVLGLVKAYSRDLQRRPTLSEVYVVKLGEWVGDVSYLDREAFLDMADELLELQAQGQA >Mature_223_residues MLLELTPEECESVIPVVPTRLQYAAYWSDALKSTGRIITAILVGVALLVLSRAFGEGSFLGAISFLVGILSLLYPFLWGP LYTISRRQLAFREIPYGGLFFGQVLRTRRYEVVVEEREKLDEDGNFYIEEVRERQFEMEIGDETGVVYRVRAKDDPRYRR IVKKQSVLGLVKAYSRDLQRRPTLSEVYVVKLGEWVGDVSYLDREAFLDMADELLELQAQGQA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25570; Mature: 25570
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLELTPEECESVIPVVPTRLQYAAYWSDALKSTGRIITAILVGVALLVLSRAFGEGSFL CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GAISFLVGILSLLYPFLWGPLYTISRRQLAFREIPYGGLFFGQVLRTRRYEVVVEEREKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DEDGNFYIEEVRERQFEMEIGDETGVVYRVRAKDDPRYRRIVKKQSVLGLVKAYSRDLQR CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RPTLSEVYVVKLGEWVGDVSYLDREAFLDMADELLELQAQGQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLLELTPEECESVIPVVPTRLQYAAYWSDALKSTGRIITAILVGVALLVLSRAFGEGSFL CCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH GAISFLVGILSLLYPFLWGPLYTISRRQLAFREIPYGGLFFGQVLRTRRYEVVVEEREKL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCC DEDGNFYIEEVRERQFEMEIGDETGVVYRVRAKDDPRYRRIVKKQSVLGLVKAYSRDLQR CCCCCHHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH RPTLSEVYVVKLGEWVGDVSYLDREAFLDMADELLELQAQGQA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA