| Definition | Synechococcus sp. JA-2-3B'a(2-13), complete genome. |
|---|---|
| Accession | NC_007776 |
| Length | 3,046,682 |
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The map label for this gene is 86607621
Identifier: 86607621
GI number: 86607621
Start: 132488
End: 133003
Strand: Direct
Name: 86607621
Synonym: CYB_0119
Alternate gene names: NA
Gene position: 132488-133003 (Clockwise)
Preceding gene: 86607619
Following gene: 86607622
Centisome position: 4.35
GC content: 56.98
Gene sequence:
>516_bases ATGATCGAGATGCATGTGGCTGGGATTGCGGTCGATGCCGTCAACCAAAACCCCATTGTCATCCTGCGCGATGGCAGTGA GCGTCGTGCCCTGCCCATTTGGGTGGGAAAAGCAGAGGCCAACGCCATTTTGCAGGCCCTGGACGACCAAAAGCCACTGC GCCCCATGACCCATGATCTCATCCTCAACTCCTGGAAGACGTGGGGGATCAAGCTGGAGCGAGTCATCATTCACGCGTTG CTGGATAACACCTTCTACGCGGTGCTCGTCACCGTGAATGGTGACAAAAAACAAGAGATCGACTGCCGCCCCAGCGACGC CATTGCCCTCGCTCTGCGGGCCCATGTTCCCATCTGGACGGTGGAAGAGGTCATTGCGGAAGCCTCGATCCCCATGAACC AAGATGCCGACGAAGCAGAGCGGGAGGCCTTTCGCAAGTTTGTAGAAAATGTAACCCCCAGAGACTTTATCCGCAGCTAC CCCATGACCGACCATCCCACCGAAGCCGACAGTTAA
Upstream 100 bases:
>100_bases CAAAGCCACTTCAACTGGACTACCAACTGAGCTCATGGTGTGTTGCCAAACTTTGACGCCCGTAGATACGATCAAGATCA CCGGCTGGAGGCAATTGCTC
Downstream 100 bases:
>100_bases GCAATTCAGGCGGAGCCCGGCAGACAGGCCATGCCCCAGGTTGCCAGGTTAACGGTCTATCCCATCAAGTCCCTGGATGG GATCCCTCTGTCTGAGGTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 171
Protein sequence:
>171_residues MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDLILNSWKTWGIKLERVIIHAL LDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWTVEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSY PMTDHPTEADS
Sequences:
>Translated_171_residues MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDLILNSWKTWGIKLERVIIHAL LDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWTVEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSY PMTDHPTEADS >Mature_171_residues MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDLILNSWKTWGIKLERVIIHAL LDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWTVEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSY PMTDHPTEADS
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 19260; Mature: 19260
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDL CEEEEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHH ILNSWKTWGIKLERVIIHALLDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWT HHHCCHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEH VEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSYPMTDHPTEADS HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIEMHVAGIAVDAVNQNPIVILRDGSERRALPIWVGKAEANAILQALDDQKPLRPMTHDL CEEEEEEEEEEEECCCCCEEEEECCCCCCEEEEEECCHHHHHHHHHHCCCCCCCCHHHHH ILNSWKTWGIKLERVIIHALLDNTFYAVLVTVNGDKKQEIDCRPSDAIALALRAHVPIWT HHHCCHHCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEECCCCEEH VEEVIAEASIPMNQDADEAEREAFRKFVENVTPRDFIRSYPMTDHPTEADS HHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]