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The map label for this gene is ssb1 [H]

Identifier: 86607619

GI number: 86607619

Start: 131259

End: 131615

Strand: Direct

Name: ssb1 [H]

Synonym: CYB_0117

Alternate gene names: 86607619

Gene position: 131259-131615 (Clockwise)

Preceding gene: 86607618

Following gene: 86607621

Centisome position: 4.31

GC content: 59.1

Gene sequence:

>357_bases
ATGAGCTTGAACCTGGTGACCTTGGTGGGGCGAGCCGGCATGGATCCGGAGGTGCGCTACTTTGAGTCAGGCAAGGTGGT
CTGTACTTTTAGCTTGGCGGTCAACCGATTCCGCAAAGGGGAAGACAAGCCCGATTGGTTCAGCCTAGAGTTGTGGGGCC
GCACTGCCGAGGTGGCGGGAGAGTATGTGCGCAAAGGCAGCCTCATCGGGGTAACGGGCAGCCTCAAGTTCAATCGCTGG
ACAGACAAATCCACCGGAGAAGAGCGCCAGAGGCCCATCATCGCTGTAGATCGCCTAGAACTGCTGGGATCCCGTCAAGA
CCGCGACTCCAACCTGCCCCCCGAAGAGCCGTTTTGA

Upstream 100 bases:

>100_bases
TCTGAGCCCAAGCTGACGGTCGCAAGCCAAAAGATGACAGGGATCCCTTGCGAGCGCTACAACAAAGGCTAGATTTACTG
GCGGTCTGGAGAAGCTGCCC

Downstream 100 bases:

>100_bases
CTTGTCTGGCCGGAGCCGGGCAACCTCAAGGTTTGGCTCTGCCCAAGCATCGCCTGCATTCCTGCACCACCTCTGTCAAA
TCCTGGCTGCACCAGGGATA

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB 1; Helix-destabilizing protein 1 [H]

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSLNLVTLVGRAGMDPEVRYFESGKVVCTFSLAVNRFRKGEDKPDWFSLELWGRTAEVAGEYVRKGSLIGVTGSLKFNRW
TDKSTGEERQRPIIAVDRLELLGSRQDRDSNLPPEEPF

Sequences:

>Translated_118_residues
MSLNLVTLVGRAGMDPEVRYFESGKVVCTFSLAVNRFRKGEDKPDWFSLELWGRTAEVAGEYVRKGSLIGVTGSLKFNRW
TDKSTGEERQRPIIAVDRLELLGSRQDRDSNLPPEEPF
>Mature_117_residues
SLNLVTLVGRAGMDPEVRYFESGKVVCTFSLAVNRFRKGEDKPDWFSLELWGRTAEVAGEYVRKGSLIGVTGSLKFNRWT
DKSTGEERQRPIIAVDRLELLGSRQDRDSNLPPEEPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair [H]

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain [H]

Homologues:

Organism=Escherichia coli, GI1790494, Length=113, Percent_Identity=38.9380530973451, Blast_Score=75, Evalue=1e-15,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344 [H]

Pfam domain/function: PF00436 SSB [H]

EC number: NA

Molecular weight: Translated: 13378; Mature: 13247

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLNLVTLVGRAGMDPEVRYFESGKVVCTFSLAVNRFRKGEDKPDWFSLELWGRTAEVAG
CCCEEEEEECCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCCHHHHH
EYVRKGSLIGVTGSLKFNRWTDKSTGEERQRPIIAVDRLELLGSRQDRDSNLPPEEPF
HHHHCCCEEEEECCEEECCCCCCCCCHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SLNLVTLVGRAGMDPEVRYFESGKVVCTFSLAVNRFRKGEDKPDWFSLELWGRTAEVAG
CCEEEEEECCCCCCCCEEEECCCCEEEEEHHHHHHHHCCCCCCCEEEEEECCCCHHHHH
EYVRKGSLIGVTGSLKFNRWTDKSTGEERQRPIIAVDRLELLGSRQDRDSNLPPEEPF
HHHHCCCEEEEECCEEECCCCCCCCCHHHCCCEEEEHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA