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The map label for this gene is ydcM [C]

Identifier: 86607528

GI number: 86607528

Start: 32083

End: 33315

Strand: Direct

Name: ydcM [C]

Synonym: CYB_0026

Alternate gene names: 86607528

Gene position: 32083-33315 (Clockwise)

Preceding gene: 86607527

Following gene: 86607529

Centisome position: 1.05

GC content: 54.83

Gene sequence:

>1233_bases
ATGACGACCACCTTTCTCCCCAACAGGAACTGGTTGAGGATATCCTCACCATCCTGCACTGCTTCAGCAGTCGGCTCTAC
GGACTCAGAAAATACCGGGCTGCAATCGAGAAAGATACGGATTTATCCGGAGCCAGCGCTGGCTAAGGTTTGGAAGCGTT
GGCAAGCGGCGTGCCGGTACTGCTACAACCAAGCGATTGCCTATCAGCGTCAGCATGGTGTTCCAAGAACGGCCAGAAAG
CTGCGGGACATCATCCTGCGCTCCGACCTGCCCCAGTGGGTAAAGGACGCCCCCTGCCACATCAAGCAGAACGCGGTCGT
CGAGGCGTGGTTGGCGTTTCGCCGAAGCAAAGACGCGAGGTTTCGCAGTGTGCGGGACAGGTCGCATACGCTGCAATTCA
ACGCCGGCAACTTTCGCAATGGGACGTGGTATCCGAAACTCACCCGAGGTTTGGCGTTCCGTGCATCCGAGGAGATGCCC
AGAGAATGGGCACGTGGAACTGAGCTAATGCGGGTGAAAGACAGATGGTATGCCATCTTTCCTGAGCCCGTGAACGAGCA
GTGTTCGTTAGCAAAGGGGGTGGTTGCGCTTGACCCTGGGGTAAGAAGCTTCCTTACAGGGTTTGATGGGGCAGGTTTTG
TAAATATTGCCAAGGGGGACTTTGGTAGAATCGCTCGGCTGTGCTACCACCTAGACGATCTGCAATCTAGGCTGAGCAAA
GCACCGAGACTCAAACGTAGGCGAATGCGGCAAGCGGCGTTTCGTCTGCGGGAGAGAATCAGGAACTTGGTGGACGAGTG
CCATCGCAAGGTAGCGGCGTTCCTAACGGATAACTACCGATTGATATTCCTCCCCACTTTCGAGTCAGCCAAGATGGTTG
CCAAGGCAGGGAGGAAGTTTGGTAGCAAGACAGCAAGGGCGATGCTCACCTGGGCGCACTATCGGTTCCAGCAGTTCCTG
AAGTTTCAAGCCAAAAAGAAAAACGTGGTCGTCGTGGAAGTATCGGAAGCGTACACCAGCAAAACCTGTACCAAGTGCGG
GCACATCCACACCAAGTTGGGTGGCGCAAAGGTGTTTAGATGCCCAAAGTGCAGCCATAGGCTACCACGAGATTGGCAAG
GCGCTCTGGGTGTTATGCTCAGAGCTTTGCGGGATACCGCCTTTCTGTTCGGAAATGGACAGAATGCTATCGCTTCACCG
TTGAGCAGTAATGCTCAGCAGTGTTCAGCGTAA

Upstream 100 bases:

>100_bases
GGAACAATTGTGGTCGCTCATCGGGATCGACTCTGCCGGTTTGGATTTGAGTTCGTTGAGTGGTACTGCCGTCAATACGG
CTGCGAAATCTTGGTTCTCG

Downstream 100 bases:

>100_bases
ATGTATCAGTTTAAGTTGAATCTGGAACCTGAAAGTTTGATGGGGATGGTGGCAAGGCTATGCAACCCAAAAGCGTTTTC
TGGAAGCGGCGGCAGGTGTT

Product: ISSoc2, transposase

Products: NA

Alternate protein names: ISSoc2 Transposase

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MTTTFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGVPRTARK
LRDIILRSDLPQWVKDAPCHIKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMP
REWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPGVRSFLTGFDGAGFVNIAKGDFGRIARLCYHLDDLQSRLSK
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTARAMLTWAHYRFQQFL
KFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFRCPKCSHRLPRDWQGALGVMLRALRDTAFLFGNGQNAIASP
LSSNAQQCSA

Sequences:

>Translated_410_residues
MTTTFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGVPRTARK
LRDIILRSDLPQWVKDAPCHIKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMP
REWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPGVRSFLTGFDGAGFVNIAKGDFGRIARLCYHLDDLQSRLSK
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTARAMLTWAHYRFQQFL
KFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFRCPKCSHRLPRDWQGALGVMLRALRDTAFLFGNGQNAIASP
LSSNAQQCSA
>Mature_409_residues
TTTFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRYCYNQAIAYQRQHGVPRTARKL
RDIILRSDLPQWVKDAPCHIKQNAVVEAWLAFRRSKDARFRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMPR
EWARGTELMRVKDRWYAIFPEPVNEQCSLAKGVVALDPGVRSFLTGFDGAGFVNIAKGDFGRIARLCYHLDDLQSRLSKA
PRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKFGSKTARAMLTWAHYRFQQFLK
FQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFRCPKCSHRLPRDWQGALGVMLRALRDTAFLFGNGQNAIASPL
SSNAQQCSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI288549314, Length=366, Percent_Identity=24.0437158469945, Blast_Score=63, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46897; Mature: 46765

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRY
CCCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
CYNQAIAYQRQHGVPRTARKLRDIILRSDLPQWVKDAPCHIKQNAVVEAWLAFRRSKDAR
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
FRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMPREWARGTELMRVKDRWYAIF
HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHEEEECCEEEEC
PEPVNEQCSLAKGVVALDPGVRSFLTGFDGAGFVNIAKGDFGRIARLCYHLDDLQSRLSK
CCCCCCHHHHHCCCEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
GSKTARAMLTWAHYRFQQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHCCCCCEEE
CPKCSHRLPRDWQGALGVMLRALRDTAFLFGNGQNAIASPLSSNAQQCSA
CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHCCHHCCHHHCCC
>Mature Secondary Structure 
TTTFLPNRNWLRISSPSCTASAVGSTDSENTGLQSRKIRIYPEPALAKVWKRWQAACRY
CCCCCCCCCEEEECCCCCCHHHCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHH
CYNQAIAYQRQHGVPRTARKLRDIILRSDLPQWVKDAPCHIKQNAVVEAWLAFRRSKDAR
HHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCHH
FRSVRDRSHTLQFNAGNFRNGTWYPKLTRGLAFRASEEMPREWARGTELMRVKDRWYAIF
HHHHHCCCCEEEECCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHCCCHHEEEECCEEEEC
PEPVNEQCSLAKGVVALDPGVRSFLTGFDGAGFVNIAKGDFGRIARLCYHLDDLQSRLSK
CCCCCCHHHHHCCCEEECCCHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHH
APRLKRRRMRQAAFRLRERIRNLVDECHRKVAAFLTDNYRLIFLPTFESAKMVAKAGRKF
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHHHH
GSKTARAMLTWAHYRFQQFLKFQAKKKNVVVVEVSEAYTSKTCTKCGHIHTKLGGAKVFR
CHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHCCHHHHCCCCCEEE
CPKCSHRLPRDWQGALGVMLRALRDTAFLFGNGQNAIASPLSSNAQQCSA
CCCCCCCCCCCHHHHHHHHHHHHHHHHEEEECCCHHHHCCHHCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA