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The map label for this gene is ynjB [H]

Identifier: 86607529

GI number: 86607529

Start: 33375

End: 34634

Strand: Direct

Name: ynjB [H]

Synonym: CYB_0027

Alternate gene names: 86607529

Gene position: 33375-34634 (Clockwise)

Preceding gene: 86607528

Following gene: 86607533

Centisome position: 1.1

GC content: 59.84

Gene sequence:

>1260_bases
ATGCAACCCAAAAGCGTTTTCTGGAAGCGGCGGCAGGTGTTGGCTGGTCTGGGATCCCTGGGGGCTTGGGCGTTGAGTCA
AGGCTCTCCGTTTGCCCAGAACACCTCCCAGAACATGGTGGATCTGGGATCCTTGAGCTGGGCGGATATTCTGGAGCGGG
CGCGGGGCAGCTCTGTCAACTGGGCCATGTGGAGCGGCAGCGAGGCCATCAATGGCTTCGTGGATGGCTGGGTGAGAAGC
CAGTTGCAGGAGCGTTATGGCATTCGCTTGAACCGGATCCCGCTCACGGATACCGTTGAAGCAGTCAACAAGGTGATTGG
GGAGGTACAGGCCGGGCTGCGCAGCGGCGGCAGCATCGATCTCATCTGGATCAATGGCAACAACTTCCGCACCCTCAAGC
AGGGGAATTTGCTCTACGGCCCCTTTGCTGAGAAATTGCCCAGCTTGACCTTCTATGATCCCGCCGATATTGCAACGGAT
TTTGGCCTGCCCACCGAGGGCTATTCTGCACCCTACACCGGCAACTACTTTTTAATGGCCTATGATGCCGAACGGGTACC
CAATCCCCCCCAGAGCCACGCCGAACTGTTGGCTTGGGCAGAGGCCAATCCAGGGCGATTTACCTACGTGGCCCCGCCGG
ATTTTCATGGCAGCCGCTTTTTGTTGAGCGCCTTCTACGGCGTGACCGGGGGCTATGCTCAATACAGCGGGCCGGACTTC
GATGCCGATCTCTGGGCGCGACAATCCCCTGCCCTGGTGGAATACCTGAGAAAGCTGGATCCCTTCCTGTGGAGACAGGG
CCAAACCTACCCGCCCACCTTTGCCCGCCTGGCGGAGCTTTTTGCCAACGGCGAAGTGTGGCTCATCCCCACCTTTATCG
ATCAGGTGATCTTGCGCAAGGGCAACGGCCAATTTCCCCCCAGCACCACCCCCTATGGGATCCCGGGCACCAGCTTGATC
GATCCCTCGTTCACGGCCATTCCCATCAATGCGGCCAATCCTTGGGGGGCAATGGTCCTGGCAGAGGTCTTGGCCAGCCC
GGAGGGGCAGCTGGAAAAGTTCAAGCCGGAGGTCTGGGGGGATCTGCCGCTCATCGATGTCAGCCGGTTGTCTGCCGACT
ACCAAACAGCTTTTGCCCAGCTGGAGGCTGCTGCCGGGATCCCCATTCAAGAGGCCATTGCCGGGGCAGTGCCCATCGTG
AACTCCGAATACACGGTGCAACTGGAGGCCCTCTGGCAGCAACAAGTCTTGCCGGGATAG

Upstream 100 bases:

>100_bases
CTTCACCGTTGAGCAGTAATGCTCAGCAGTGTTCAGCGTAAATGTATCAGTTTAAGTTGAATCTGGAACCTGAAAGTTTG
ATGGGGATGGTGGCAAGGCT

Downstream 100 bases:

>100_bases
GGGTCAGGTATGCCCCTCACCCCCAGCCTCTTTCCAAAAGGGGAGGTCTTCTGACATTGGGGGTGGGCCGGGCAATGGCG
GAGCAGGATCCTCACCTTGG

Product: ABC transporter solute-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MQPKSVFWKRRQVLAGLGSLGAWALSQGSPFAQNTSQNMVDLGSLSWADILERARGSSVNWAMWSGSEAINGFVDGWVRS
QLQERYGIRLNRIPLTDTVEAVNKVIGEVQAGLRSGGSIDLIWINGNNFRTLKQGNLLYGPFAEKLPSLTFYDPADIATD
FGLPTEGYSAPYTGNYFLMAYDAERVPNPPQSHAELLAWAEANPGRFTYVAPPDFHGSRFLLSAFYGVTGGYAQYSGPDF
DADLWARQSPALVEYLRKLDPFLWRQGQTYPPTFARLAELFANGEVWLIPTFIDQVILRKGNGQFPPSTTPYGIPGTSLI
DPSFTAIPINAANPWGAMVLAEVLASPEGQLEKFKPEVWGDLPLIDVSRLSADYQTAFAQLEAAAGIPIQEAIAGAVPIV
NSEYTVQLEALWQQQVLPG

Sequences:

>Translated_419_residues
MQPKSVFWKRRQVLAGLGSLGAWALSQGSPFAQNTSQNMVDLGSLSWADILERARGSSVNWAMWSGSEAINGFVDGWVRS
QLQERYGIRLNRIPLTDTVEAVNKVIGEVQAGLRSGGSIDLIWINGNNFRTLKQGNLLYGPFAEKLPSLTFYDPADIATD
FGLPTEGYSAPYTGNYFLMAYDAERVPNPPQSHAELLAWAEANPGRFTYVAPPDFHGSRFLLSAFYGVTGGYAQYSGPDF
DADLWARQSPALVEYLRKLDPFLWRQGQTYPPTFARLAELFANGEVWLIPTFIDQVILRKGNGQFPPSTTPYGIPGTSLI
DPSFTAIPINAANPWGAMVLAEVLASPEGQLEKFKPEVWGDLPLIDVSRLSADYQTAFAQLEAAAGIPIQEAIAGAVPIV
NSEYTVQLEALWQQQVLPG
>Mature_419_residues
MQPKSVFWKRRQVLAGLGSLGAWALSQGSPFAQNTSQNMVDLGSLSWADILERARGSSVNWAMWSGSEAINGFVDGWVRS
QLQERYGIRLNRIPLTDTVEAVNKVIGEVQAGLRSGGSIDLIWINGNNFRTLKQGNLLYGPFAEKLPSLTFYDPADIATD
FGLPTEGYSAPYTGNYFLMAYDAERVPNPPQSHAELLAWAEANPGRFTYVAPPDFHGSRFLLSAFYGVTGGYAQYSGPDF
DADLWARQSPALVEYLRKLDPFLWRQGQTYPPTFARLAELFANGEVWLIPTFIDQVILRKGNGQFPPSTTPYGIPGTSLI
DPSFTAIPINAANPWGAMVLAEVLASPEGQLEKFKPEVWGDLPLIDVSRLSADYQTAFAQLEAAAGIPIQEAIAGAVPIV
NSEYTVQLEALWQQQVLPG

Specific function: Unknown

COG id: COG4134

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081966, Length=363, Percent_Identity=36.0881542699724, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 45957; Mature: 45957

Theoretical pI: Translated: 4.49; Mature: 4.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPKSVFWKRRQVLAGLGSLGAWALSQGSPFAQNTSQNMVDLGSLSWADILERARGSSVN
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCE
WAMWSGSEAINGFVDGWVRSQLQERYGIRLNRIPLTDTVEAVNKVIGEVQAGLRSGGSID
EEEECCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LIWINGNNFRTLKQGNLLYGPFAEKLPSLTFYDPADIATDFGLPTEGYSAPYTGNYFLMA
EEEECCCCEEEEECCCEEECCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEE
YDAERVPNPPQSHAELLAWAEANPGRFTYVAPPDFHGSRFLLSAFYGVTGGYAQYSGPDF
EEHHHCCCCCHHHHHEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
DADLWARQSPALVEYLRKLDPFLWRQGQTYPPTFARLAELFANGEVWLIPTFIDQVILRK
CHHHHCCCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHC
GNGQFPPSTTPYGIPGTSLIDPSFTAIPINAANPWGAMVLAEVLASPEGQLEKFKPEVWG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHCCHHHCC
DLPLIDVSRLSADYQTAFAQLEAAAGIPIQEAIAGAVPIVNSEYTVQLEALWQQQVLPG
CCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCEEEEHHHHHHHHCCCC
>Mature Secondary Structure
MQPKSVFWKRRQVLAGLGSLGAWALSQGSPFAQNTSQNMVDLGSLSWADILERARGSSVN
CCCHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCHHCCCCCHHHHHHHHCCCCCE
WAMWSGSEAINGFVDGWVRSQLQERYGIRLNRIPLTDTVEAVNKVIGEVQAGLRSGGSID
EEEECCCHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHCCCCCEE
LIWINGNNFRTLKQGNLLYGPFAEKLPSLTFYDPADIATDFGLPTEGYSAPYTGNYFLMA
EEEECCCCEEEEECCCEEECCHHHHCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEEEE
YDAERVPNPPQSHAELLAWAEANPGRFTYVAPPDFHGSRFLLSAFYGVTGGYAQYSGPDF
EEHHHCCCCCHHHHHEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCC
DADLWARQSPALVEYLRKLDPFLWRQGQTYPPTFARLAELFANGEVWLIPTFIDQVILRK
CHHHHCCCCCHHHHHHHHHCHHHHCCCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHC
GNGQFPPSTTPYGIPGTSLIDPSFTAIPINAANPWGAMVLAEVLASPEGQLEKFKPEVWG
CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCHHHHCCHHHCC
DLPLIDVSRLSADYQTAFAQLEAAAGIPIQEAIAGAVPIVNSEYTVQLEALWQQQVLPG
CCCEEEHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCEEEEHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503; 10806384 [H]