Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is yfcK [C]

Identifier: 86606743

GI number: 86606743

Start: 2119978

End: 2120823

Strand: Reverse

Name: yfcK [C]

Synonym: CYA_2103

Alternate gene names: 86606743

Gene position: 2120823-2119978 (Counterclockwise)

Preceding gene: 86606747

Following gene: 86606742

Centisome position: 72.31

GC content: 65.96

Gene sequence:

>846_bases
TTGACCACAGGGGATGGATCCCTGACCTTTTTCTCCCAAGAGTTCGGGCAGGCTTTCCATAACACCAGCGGCGCTGCCCA
GGAAGCGCTGGAGAAGTTTGTCCGCCCTTGCCGGCTGGATCGCCTGCCGTTGGAGCGGGATCCGGACGATCCCATTCGCC
TCTTGGATATTTGCTTTGGCCTCGGCTACAACTCCGGCCTGGCCTTGGAGACGATTTGGCAGGTGCGGCCCGATTGCCCT
GTGGAAGTCATTGGCCTGGAGCGATCCCCAGAGGTGCCCCGCCAGGCCTGGCAGGTGGGGGTGGGATCCACCTGGAGCTT
TGGCCAGGAGTGGCAACACTTGATCGAGCAGGGATCCTGGCAATCGCCGCGCTGGCGGGGAACCCTGCTGTGGGGAGATG
CCCGGCAAACCCTGCTCCAGGTGCCGCCGGGATGGGCGGATGCGGTGTTTTTGGATCCCTTCTCCCCTTCGGTTTGCCCG
GAGCTGTGGACGGTGGACTTCTTGCGGGCAGTGGCCGAGCGAATGCGCCCCAGCGGGATCCTGGCCACCTATTCCTGTGC
GGCGGCGGTGCGGGCGGCCTTGCTGGAGGCGGGGCTATTCATTGGCTCGACGCCGCCGGTGGGCCGCCCCTGGCCGGGCA
CGGTGGCCTCGCCCCAACCGCATCACCTGCCGCCCCTCTCGCCCATGGAGTGGGAGCACCTGCGAACCCGCGCCGCGGTG
CCCTACCGGGATCCTACCTTGCAAGGGGATAGAGCCCAGATTCGGCTGCAACGCCAGCGAGAACAGCAAACTTCACCCCT
TGAGCCCACTTCCGCCTGGAAACGCCGCTGGCCTGTGCAAGCCTAG

Upstream 100 bases:

>100_bases
CTGCGAAACTCATCTTAACGTTCTCAAGCTATCAAAGAATCGCCAAGCTGGAAATAGAGACTTGCAATAGCCCATGACCG
CAGAAACCCAGTGGCAGGTG

Downstream 100 bases:

>100_bases
CGACCGGAGTGCAGATCTGGGCAGCTTTTGCCGGAATTGCTGTCTGAGTGTATCCAAGACACCTGCACCAGTCCCGTACC
CTTACGCAAGCTGCCGTGTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MTTGDGSLTFFSQEFGQAFHNTSGAAQEALEKFVRPCRLDRLPLERDPDDPIRLLDICFGLGYNSGLALETIWQVRPDCP
VEVIGLERSPEVPRQAWQVGVGSTWSFGQEWQHLIEQGSWQSPRWRGTLLWGDARQTLLQVPPGWADAVFLDPFSPSVCP
ELWTVDFLRAVAERMRPSGILATYSCAAAVRAALLEAGLFIGSTPPVGRPWPGTVASPQPHHLPPLSPMEWEHLRTRAAV
PYRDPTLQGDRAQIRLQRQREQQTSPLEPTSAWKRRWPVQA

Sequences:

>Translated_281_residues
MTTGDGSLTFFSQEFGQAFHNTSGAAQEALEKFVRPCRLDRLPLERDPDDPIRLLDICFGLGYNSGLALETIWQVRPDCP
VEVIGLERSPEVPRQAWQVGVGSTWSFGQEWQHLIEQGSWQSPRWRGTLLWGDARQTLLQVPPGWADAVFLDPFSPSVCP
ELWTVDFLRAVAERMRPSGILATYSCAAAVRAALLEAGLFIGSTPPVGRPWPGTVASPQPHHLPPLSPMEWEHLRTRAAV
PYRDPTLQGDRAQIRLQRQREQQTSPLEPTSAWKRRWPVQA
>Mature_280_residues
TTGDGSLTFFSQEFGQAFHNTSGAAQEALEKFVRPCRLDRLPLERDPDDPIRLLDICFGLGYNSGLALETIWQVRPDCPV
EVIGLERSPEVPRQAWQVGVGSTWSFGQEWQHLIEQGSWQSPRWRGTLLWGDARQTLLQVPPGWADAVFLDPFSPSVCPE
LWTVDFLRAVAERMRPSGILATYSCAAAVRAALLEAGLFIGSTPPVGRPWPGTVASPQPHHLPPLSPMEWEHLRTRAAVP
YRDPTLQGDRAQIRLQRQREQQTSPLEPTSAWKRRWPVQA

Specific function: Unknown

COG id: COG4121

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008471 [H]

Pfam domain/function: PF05430 DUF752 [H]

EC number: NA

Molecular weight: Translated: 31563; Mature: 31432

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTGDGSLTFFSQEFGQAFHNTSGAAQEALEKFVRPCRLDRLPLERDPDDPIRLLDICFG
CCCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LGYNSGLALETIWQVRPDCPVEVIGLERSPEVPRQAWQVGVGSTWSFGQEWQHLIEQGSW
CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCC
QSPRWRGTLLWGDARQTLLQVPPGWADAVFLDPFSPSVCPELWTVDFLRAVAERMRPSGI
CCCCEEEEEEECHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LATYSCAAAVRAALLEAGLFIGSTPPVGRPWPGTVASPQPHHLPPLSPMEWEHLRTRAAV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PYRDPTLQGDRAQIRLQRQREQQTSPLEPTSAWKRRWPVQA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC
>Mature Secondary Structure 
TTGDGSLTFFSQEFGQAFHNTSGAAQEALEKFVRPCRLDRLPLERDPDDPIRLLDICFG
CCCCCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
LGYNSGLALETIWQVRPDCPVEVIGLERSPEVPRQAWQVGVGSTWSFGQEWQHLIEQGSW
CCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHCCCC
QSPRWRGTLLWGDARQTLLQVPPGWADAVFLDPFSPSVCPELWTVDFLRAVAERMRPSGI
CCCCEEEEEEECHHHHHHHHCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCC
LATYSCAAAVRAALLEAGLFIGSTPPVGRPWPGTVASPQPHHLPPLSPMEWEHLRTRAAV
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCC
PYRDPTLQGDRAQIRLQRQREQQTSPLEPTSAWKRRWPVQA
CCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]