| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is yfbL [H]
Identifier: 86606697
GI number: 86606697
Start: 2075577
End: 2076425
Strand: Reverse
Name: yfbL [H]
Synonym: CYA_2057
Alternate gene names: 86606697
Gene position: 2076425-2075577 (Counterclockwise)
Preceding gene: 86606698
Following gene: 86606696
Centisome position: 70.8
GC content: 65.25
Gene sequence:
>849_bases GTGACCCGAGAGCCCAATCTGCAACAGCGCCTCCGGGAGCACCTGCAGCAAGTAGCTCAGCCCCGCGATCCCGACTGGTC GCCTTTGGGCCACCGGCAGGTGGAGCAGTATGTCCAAAAACAGCTTTCCGAGTGCGGCCCGGTGGAGCCCTTCCCCTTTG AGGCCAATGGCTGCCAGCACCGCAACTGGATCTTGAAATTGCCGGGATCCCAGCCTGGCCGCAGGCCCATTTTAATCGGG GCCCACTTCGACGCCGCGCCTGCTACCCCCGGCGCCGACGACAACGCCAGCGGCGTGGCGGTGTTGCTGGAGTTGGCCCG CCATTTTGCCGCCGAGCCCGCCCCTTCCCCCCTGTGGCTAGTGGCCTTCGACCTAGAAGAGCGGGGCCTGCTAGGGAGCA AAGCCTACGCCCGCTTTCTCAGACAACAGCGCCAACCCCTGCGGCTGATGCTCTCTCTGGAGATGCTGGGCTACCGGGAT CCCACGCCCGGATCCCAGCGCTACCCCGCCGGCCTGGAGCGGCTCTACCCCGACCGGGGAGATTACATCGGTCTCATTGG CAACTGGCCCGCCCTGGGGGATCTGCTTAGGCTGCAGCGCGGTTTTCAGCAGGTGGGGATCCCGTGTTGCTGGCTGCCAG CCGGCCAGCGGGGTTTGTTCCTGCCGGTTACCCGCCTCAGCGACCACTCCCCCTTTTGGGATGCGGGCTACCCTGCGGCT ATGGTGACCGACACCGCCTTTTTGCGCAACCCCCACTACCACAAGCTGAGCGACACCCTCGAGACCCTAGATCTTGCCTT TTTGAGTGGGGTCTGCCGCGGCTTGAGGCAGGGTCTTGGATCCCTCTAG
Upstream 100 bases:
>100_bases TGCCGTTTCAGGTGTTGGCGGGAAGGGCGGGATCCCACAGCCACTTTACTCTGGAGCTGGCTCGCCAAGTCCACGCTCAA GCCCTCGCCGGACAAGAAAA
Downstream 100 bases:
>100_bases GCCGTGAGATCCCTCGATTCCCAACTCCCCTCTCCCTCTGGGAGAGGGGCTGGGGGTGAGGGTGCCTCTGGGAGAGGGGC TGGGGGTGAAGGCCAGCGGC
Product: M28A family peptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 282; Mature: 281
Protein sequence:
>282_residues MTREPNLQQRLREHLQQVAQPRDPDWSPLGHRQVEQYVQKQLSECGPVEPFPFEANGCQHRNWILKLPGSQPGRRPILIG AHFDAAPATPGADDNASGVAVLLELARHFAAEPAPSPLWLVAFDLEERGLLGSKAYARFLRQQRQPLRLMLSLEMLGYRD PTPGSQRYPAGLERLYPDRGDYIGLIGNWPALGDLLRLQRGFQQVGIPCCWLPAGQRGLFLPVTRLSDHSPFWDAGYPAA MVTDTAFLRNPHYHKLSDTLETLDLAFLSGVCRGLRQGLGSL
Sequences:
>Translated_282_residues MTREPNLQQRLREHLQQVAQPRDPDWSPLGHRQVEQYVQKQLSECGPVEPFPFEANGCQHRNWILKLPGSQPGRRPILIG AHFDAAPATPGADDNASGVAVLLELARHFAAEPAPSPLWLVAFDLEERGLLGSKAYARFLRQQRQPLRLMLSLEMLGYRD PTPGSQRYPAGLERLYPDRGDYIGLIGNWPALGDLLRLQRGFQQVGIPCCWLPAGQRGLFLPVTRLSDHSPFWDAGYPAA MVTDTAFLRNPHYHKLSDTLETLDLAFLSGVCRGLRQGLGSL >Mature_281_residues TREPNLQQRLREHLQQVAQPRDPDWSPLGHRQVEQYVQKQLSECGPVEPFPFEANGCQHRNWILKLPGSQPGRRPILIGA HFDAAPATPGADDNASGVAVLLELARHFAAEPAPSPLWLVAFDLEERGLLGSKAYARFLRQQRQPLRLMLSLEMLGYRDP TPGSQRYPAGLERLYPDRGDYIGLIGNWPALGDLLRLQRGFQQVGIPCCWLPAGQRGLFLPVTRLSDHSPFWDAGYPAAM VTDTAFLRNPHYHKLSDTLETLDLAFLSGVCRGLRQGLGSL
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082079, Length=290, Percent_Identity=33.448275862069, Blast_Score=137, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007484 [H]
Pfam domain/function: PF04389 Peptidase_M28 [H]
EC number: NA
Molecular weight: Translated: 31541; Mature: 31410
Theoretical pI: Translated: 7.93; Mature: 7.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTREPNLQQRLREHLQQVAQPRDPDWSPLGHRQVEQYVQKQLSECGPVEPFPFEANGCQH CCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RNWILKLPGSQPGRRPILIGAHFDAAPATPGADDNASGVAVLLELARHFAAEPAPSPLWL CCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE VAFDLEERGLLGSKAYARFLRQQRQPLRLMLSLEMLGYRDPTPGSQRYPAGLERLYPDRG EEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCC DYIGLIGNWPALGDLLRLQRGFQQVGIPCCWLPAGQRGLFLPVTRLSDHSPFWDAGYPAA CEEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEHHCCCCCCCCCCCCCHH MVTDTAFLRNPHYHKLSDTLETLDLAFLSGVCRGLRQGLGSL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TREPNLQQRLREHLQQVAQPRDPDWSPLGHRQVEQYVQKQLSECGPVEPFPFEANGCQH CCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC RNWILKLPGSQPGRRPILIGAHFDAAPATPGADDNASGVAVLLELARHFAAEPAPSPLWL CCEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEE VAFDLEERGLLGSKAYARFLRQQRQPLRLMLSLEMLGYRDPTPGSQRYPAGLERLYPDRG EEECCCCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCCCC DYIGLIGNWPALGDLLRLQRGFQQVGIPCCWLPAGQRGLFLPVTRLSDHSPFWDAGYPAA CEEEEEECCHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEEHHCCCCCCCCCCCCCHH MVTDTAFLRNPHYHKLSDTLETLDLAFLSGVCRGLRQGLGSL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]