| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606696
Identifier: 86606696
GI number: 86606696
Start: 2074539
End: 2075300
Strand: Reverse
Name: 86606696
Synonym: CYA_2056
Alternate gene names: NA
Gene position: 2075300-2074539 (Counterclockwise)
Preceding gene: 86606697
Following gene: 86606695
Centisome position: 70.76
GC content: 59.97
Gene sequence:
>762_bases ATGAATACCTTCGCCCAAGCCCCCAAAAAGTGCGTCTCTGCCGTTTTCAAAGAAGAAGCCAAAGTCCAAGAGTGCATCCA GCGCCTGCTCAACCGCGGTATCCCCAACGACCGCATCTCCATCATTGGCCGCAACTTTCAAACGGAAGCCAAAATTAGTG GCTTTATCACTCGCAAAGATGTGGTTCTCGATGGCTTGACCAGCGGCGCCATCTACGGATCCCTGTTTGGATCGCTGCTG GGGCTCCTCACGGGGGTAGGGGTGCTGTTTATTCCCTTTTTGGGGGCGGTGGTGGCCGCCGGGCCACTAGGAGCGGCGCT GCTGGGGGCAACCGGTGGCGCTCTCTACGGGGCGCTGGGAGCGGGGCTGGGATCCGCCCTCATTGCCCTGGGCATGCCAC AGGAGAAGGCCGCCATCTACCAGACGCGGGTGCAGGCGGGCGAATTCCTGTTGGTGGTGCAGGTGCCGGAGGAAAAAGCG GGCGAAATCTACTTGCTGCTGCAAAGTGCCGGCGGCGAAGAGGTGGCCACTGCCGACTTGAACTTGCCCAGCGAGCCAGA GGGATCCCTGACTCCCGAAACCATCTCCCCCGAGATCCGCGCCGATCTCTCAGAAGAAGCCCAGCAAACCTTTGTGGAAG CCTACAACCAGGCCAAGGCAGAGGGCAGCCCGGTCACCCAGGCGCTGCTCAAGGCTTGGGAAAAGGTCAAACAAGTTTTC ACAAGAGACGACAAGGGGATTTTCTCCAGGCGCAAACCCTAG
Upstream 100 bases:
>100_bases GACAGAGGGAGATAATAGGCGGCATAGGCAAAGAGGGGAAAAGTTTGCCAAAAAACCTCCCTTAGCCTTTTGGGTCAAAA CTTTCACAGGAGCCTTTTTC
Downstream 100 bases:
>100_bases GGGAGTGCTCTCAGGGGCAAGGACAGAGCTAAGTGTTTCTCCCTCGCTCTGGGTTTTCCGATTGCACCTCTAGCCTGAAG GTATCCTAAAAGCCTTAACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 253
Protein sequence:
>253_residues MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKDVVLDGLTSGAIYGSLFGSLL GLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALGAGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKA GEIYLLLQSAGGEEVATADLNLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF TRDDKGIFSRRKP
Sequences:
>Translated_253_residues MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKDVVLDGLTSGAIYGSLFGSLL GLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALGAGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKA GEIYLLLQSAGGEEVATADLNLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF TRDDKGIFSRRKP >Mature_253_residues MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKDVVLDGLTSGAIYGSLFGSLL GLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALGAGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKA GEIYLLLQSAGGEEVATADLNLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF TRDDKGIFSRRKP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009317 [H]
Pfam domain/function: PF06150 ChaB [H]
EC number: NA
Molecular weight: Translated: 26707; Mature: 26707
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH VVLDGLTSGAIYGSLFGSLLGLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH AGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKAGEIYLLLQSAGGEEVATADL HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEC NLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TRDDKGIFSRRKP HCCCCCCCCCCCC >Mature Secondary Structure MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH VVLDGLTSGAIYGSLFGSLLGLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALG HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH AGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKAGEIYLLLQSAGGEEVATADL HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEC NLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH TRDDKGIFSRRKP HCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA