Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606696

Identifier: 86606696

GI number: 86606696

Start: 2074539

End: 2075300

Strand: Reverse

Name: 86606696

Synonym: CYA_2056

Alternate gene names: NA

Gene position: 2075300-2074539 (Counterclockwise)

Preceding gene: 86606697

Following gene: 86606695

Centisome position: 70.76

GC content: 59.97

Gene sequence:

>762_bases
ATGAATACCTTCGCCCAAGCCCCCAAAAAGTGCGTCTCTGCCGTTTTCAAAGAAGAAGCCAAAGTCCAAGAGTGCATCCA
GCGCCTGCTCAACCGCGGTATCCCCAACGACCGCATCTCCATCATTGGCCGCAACTTTCAAACGGAAGCCAAAATTAGTG
GCTTTATCACTCGCAAAGATGTGGTTCTCGATGGCTTGACCAGCGGCGCCATCTACGGATCCCTGTTTGGATCGCTGCTG
GGGCTCCTCACGGGGGTAGGGGTGCTGTTTATTCCCTTTTTGGGGGCGGTGGTGGCCGCCGGGCCACTAGGAGCGGCGCT
GCTGGGGGCAACCGGTGGCGCTCTCTACGGGGCGCTGGGAGCGGGGCTGGGATCCGCCCTCATTGCCCTGGGCATGCCAC
AGGAGAAGGCCGCCATCTACCAGACGCGGGTGCAGGCGGGCGAATTCCTGTTGGTGGTGCAGGTGCCGGAGGAAAAAGCG
GGCGAAATCTACTTGCTGCTGCAAAGTGCCGGCGGCGAAGAGGTGGCCACTGCCGACTTGAACTTGCCCAGCGAGCCAGA
GGGATCCCTGACTCCCGAAACCATCTCCCCCGAGATCCGCGCCGATCTCTCAGAAGAAGCCCAGCAAACCTTTGTGGAAG
CCTACAACCAGGCCAAGGCAGAGGGCAGCCCGGTCACCCAGGCGCTGCTCAAGGCTTGGGAAAAGGTCAAACAAGTTTTC
ACAAGAGACGACAAGGGGATTTTCTCCAGGCGCAAACCCTAG

Upstream 100 bases:

>100_bases
GACAGAGGGAGATAATAGGCGGCATAGGCAAAGAGGGGAAAAGTTTGCCAAAAAACCTCCCTTAGCCTTTTGGGTCAAAA
CTTTCACAGGAGCCTTTTTC

Downstream 100 bases:

>100_bases
GGGAGTGCTCTCAGGGGCAAGGACAGAGCTAAGTGTTTCTCCCTCGCTCTGGGTTTTCCGATTGCACCTCTAGCCTGAAG
GTATCCTAAAAGCCTTAACC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 253

Protein sequence:

>253_residues
MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKDVVLDGLTSGAIYGSLFGSLL
GLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALGAGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKA
GEIYLLLQSAGGEEVATADLNLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF
TRDDKGIFSRRKP

Sequences:

>Translated_253_residues
MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKDVVLDGLTSGAIYGSLFGSLL
GLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALGAGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKA
GEIYLLLQSAGGEEVATADLNLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF
TRDDKGIFSRRKP
>Mature_253_residues
MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKDVVLDGLTSGAIYGSLFGSLL
GLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALGAGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKA
GEIYLLLQSAGGEEVATADLNLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF
TRDDKGIFSRRKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009317 [H]

Pfam domain/function: PF06150 ChaB [H]

EC number: NA

Molecular weight: Translated: 26707; Mature: 26707

Theoretical pI: Translated: 4.96; Mature: 4.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
VVLDGLTSGAIYGSLFGSLLGLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH
AGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKAGEIYLLLQSAGGEEVATADL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEC
NLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TRDDKGIFSRRKP
HCCCCCCCCCCCC
>Mature Secondary Structure
MNTFAQAPKKCVSAVFKEEAKVQECIQRLLNRGIPNDRISIIGRNFQTEAKISGFITRKD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCHHHHHHHHHHHH
VVLDGLTSGAIYGSLFGSLLGLLTGVGVLFIPFLGAVVAAGPLGAALLGATGGALYGALG
HHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHH
AGLGSALIALGMPQEKAAIYQTRVQAGEFLLVVQVPEEKAGEIYLLLQSAGGEEVATADL
HHHHHHHHHHCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEECCCCCCEEEEEC
NLPSEPEGSLTPETISPEIRADLSEEAQQTFVEAYNQAKAEGSPVTQALLKAWEKVKQVF
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
TRDDKGIFSRRKP
HCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA