| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is bcsA [H]
Identifier: 86606690
GI number: 86606690
Start: 2069890
End: 2071383
Strand: Reverse
Name: bcsA [H]
Synonym: CYA_2050
Alternate gene names: 86606690
Gene position: 2071383-2069890 (Counterclockwise)
Preceding gene: 86606691
Following gene: 86606689
Centisome position: 70.63
GC content: 64.32
Gene sequence:
>1494_bases GTGAGATCCAGGGCTGTGCAGGTGTACTTGTTTCGGGGAGTGGGGTTGCTCCACCTTATCGCTGGGGTGGCGTACCTCTA CTGGCGCATCAGCGAGGGGCTGACCGGTCTGGGATCCCTTCTGTTTTGGGGGGCAGAGCTGTACGTTTGGCTGGCGGCGG TGGGCTTTATCCTCAGCCGCTATCCCCAGGTGCCGCAGGAGGGGGTGCCCGCGCCCGAGGTGCTGCGGCGGGCGTTTTTT CAACTGCCGCGGGTGGACGTGCTGGTGCTGCGCCAGCGGGATTCCGTGGAAGCGACCCGGCAGACGGTGCTCTCGGCCCT GCGCCTGGATTACCCCTGGGAGCGGCTGTTTGTCCATATTGTGGATCGGGTGGAAGATGCGGAGATGGCTAAAGTGGCGC GGGCCATCCCCTGCGAGTACTGGTCTTGCCCAAGCCCCACGACCGATCCCCTAGCCTACATGCTGGGATCCGGCCAGCTC CAGGGAGAATATCTGCTCCTGCTGCATCCCGGCCATTTTGTCGAGCCGGATTTTTTGTGGCAGACGTTGCCCCTGTTTTA CGACTTTCCGGAGCGGGCCCCGATTGCCAATGCCACCGGCTTTGTGCAGGCAACGCTGCGCACCCTGGGCCAGCCCAGGG CGGTTCACCCGCTGCAGCAGCTTTTGGCGGTGGGATCCCAGGGCTACCAGGCGGCGCCGCTGCTGGGATCTGGCTGTCTC ATTCGGCGGGCAGCTTTGGAGGGGATCCCGCAAATCGACATTCGCCGCCCTGTGCAGTTGGGGTGTCAGATGCACTGCCG CGGCTGGCAGTCCCACCTAGTGCGCCCAGCCCAGGTCACTGGCATTTTGTTGCCGTTGCGCAACCGCCGCGTCGCTCTGC TGGCGGTGTTTTCTGCCCTGCGGGAAAACCCCTTCTGGAGCAAGCCCACCACGCAGCAGCAGCGCTTTCAGTACCTGTGG CTGGCCCTCTGGGCTGCGGGCGGGGTGGCGGAGCTGGCCTATTTAGCGGTGCCCATCCTCTTTCTCTGCACAGGCTGGAT GCCGGTGCCGGCCTTTGATAGAGTCTTCTTTGCCTGGTTTCTTCCCTACGCCCTGCTGGGGCGCCTCACCTGGCTGTTGG CTTTTCCCCCGTCGCTGTGGGGAGCGGCGTGGCAGTCGGAGCGGCAGACGGGCAGCCAGTTTTTCCAGTCCATCCAGGCG CTGGTGCAGGCGGTGCGGGGGGTGCCCCCCTACCCCGAACAGCCGTCCCAGCTTGCCCTCGGCCCGCAGGCGCTGGCTAT TGTGCTGACGTTGTTGGCCATGGGGGTGGGATCCCTGCGCTTTGCCGGCAACTGGGATCCAACCTGGCCAGAGCTGCTGT TTGGCCTAGTCTGGGCCTTCTACAACCTGATGGTTCTAACGGTGCGCCCGGACGATCACGATTTTGCCGGCTTTGCCTTG CGTAGCCACAACCCGGCAGCGGAAGAAACAACAGATGCGCTCTCCAACTCCTAG
Upstream 100 bases:
>100_bases CAACTGGGCAAGACAGCTCAACTGGTTCCATTCCTCAGCCTGCAGCTGGGCAAAGGGGGGATCCTGGCTTGGCCCAATCC CAATCCTGTGTGGAGCGCCT
Downstream 100 bases:
>100_bases GGCTGCCAAGCCAGGCACACGGCAAAGCCAAATCCCCCTATTATTCCGCTGTTGCATGGAGAGCATAGAGAAAATGGCCG GCTGCCCCGGCGGAAGTGGT
Product: cellulose synthase, catalytic subunit-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 497; Mature: 497
Protein sequence:
>497_residues MRSRAVQVYLFRGVGLLHLIAGVAYLYWRISEGLTGLGSLLFWGAELYVWLAAVGFILSRYPQVPQEGVPAPEVLRRAFF QLPRVDVLVLRQRDSVEATRQTVLSALRLDYPWERLFVHIVDRVEDAEMAKVARAIPCEYWSCPSPTTDPLAYMLGSGQL QGEYLLLLHPGHFVEPDFLWQTLPLFYDFPERAPIANATGFVQATLRTLGQPRAVHPLQQLLAVGSQGYQAAPLLGSGCL IRRAALEGIPQIDIRRPVQLGCQMHCRGWQSHLVRPAQVTGILLPLRNRRVALLAVFSALRENPFWSKPTTQQQRFQYLW LALWAAGGVAELAYLAVPILFLCTGWMPVPAFDRVFFAWFLPYALLGRLTWLLAFPPSLWGAAWQSERQTGSQFFQSIQA LVQAVRGVPPYPEQPSQLALGPQALAIVLTLLAMGVGSLRFAGNWDPTWPELLFGLVWAFYNLMVLTVRPDDHDFAGFAL RSHNPAAEETTDALSNS
Sequences:
>Translated_497_residues MRSRAVQVYLFRGVGLLHLIAGVAYLYWRISEGLTGLGSLLFWGAELYVWLAAVGFILSRYPQVPQEGVPAPEVLRRAFF QLPRVDVLVLRQRDSVEATRQTVLSALRLDYPWERLFVHIVDRVEDAEMAKVARAIPCEYWSCPSPTTDPLAYMLGSGQL QGEYLLLLHPGHFVEPDFLWQTLPLFYDFPERAPIANATGFVQATLRTLGQPRAVHPLQQLLAVGSQGYQAAPLLGSGCL IRRAALEGIPQIDIRRPVQLGCQMHCRGWQSHLVRPAQVTGILLPLRNRRVALLAVFSALRENPFWSKPTTQQQRFQYLW LALWAAGGVAELAYLAVPILFLCTGWMPVPAFDRVFFAWFLPYALLGRLTWLLAFPPSLWGAAWQSERQTGSQFFQSIQA LVQAVRGVPPYPEQPSQLALGPQALAIVLTLLAMGVGSLRFAGNWDPTWPELLFGLVWAFYNLMVLTVRPDDHDFAGFAL RSHNPAAEETTDALSNS >Mature_497_residues MRSRAVQVYLFRGVGLLHLIAGVAYLYWRISEGLTGLGSLLFWGAELYVWLAAVGFILSRYPQVPQEGVPAPEVLRRAFF QLPRVDVLVLRQRDSVEATRQTVLSALRLDYPWERLFVHIVDRVEDAEMAKVARAIPCEYWSCPSPTTDPLAYMLGSGQL QGEYLLLLHPGHFVEPDFLWQTLPLFYDFPERAPIANATGFVQATLRTLGQPRAVHPLQQLLAVGSQGYQAAPLLGSGCL IRRAALEGIPQIDIRRPVQLGCQMHCRGWQSHLVRPAQVTGILLPLRNRRVALLAVFSALRENPFWSKPTTQQQRFQYLW LALWAAGGVAELAYLAVPILFLCTGWMPVPAFDRVFFAWFLPYALLGRLTWLLAFPPSLWGAAWQSERQTGSQFFQSIQA LVQAVRGVPPYPEQPSQLALGPQALAIVLTLLAMGVGSLRFAGNWDPTWPELLFGLVWAFYNLMVLTVRPDDHDFAGFAL RSHNPAAEETTDALSNS
Specific function: Catalytic subunit of cellulose synthase. It polymerizes uridine 5'-diphosphate glucose to cellulose, which is produced as an extracellular component for mechanical and chemical protection at the onset of the stationary phase, when the cells exhibit multic
COG id: COG1215
COG function: function code M; Glycosyltransferases, probably involved in cell wall biogenesis
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PilZ domain [H]
Homologues:
Organism=Escherichia coli, GI87082284, Length=496, Percent_Identity=20.5645161290323, Blast_Score=68, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003919 - InterPro: IPR001173 - InterPro: IPR009875 [H]
Pfam domain/function: PF00535 Glycos_transf_2; PF07238 PilZ [H]
EC number: =2.4.1.12 [H]
Molecular weight: Translated: 55696; Mature: 55696
Theoretical pI: Translated: 8.35; Mature: 8.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSRAVQVYLFRGVGLLHLIAGVAYLYWRISEGLTGLGSLLFWGAELYVWLAAVGFILSR CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH YPQVPQEGVPAPEVLRRAFFQLPRVDVLVLRQRDSVEATRQTVLSALRLDYPWERLFVHI CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHH VDRVEDAEMAKVARAIPCEYWSCPSPTTDPLAYMLGSGQLQGEYLLLLHPGHFVEPDFLW HHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHH QTLPLFYDFPERAPIANATGFVQATLRTLGQPRAVHPLQQLLAVGSQGYQAAPLLGSGCL HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCHH IRRAALEGIPQIDIRRPVQLGCQMHCRGWQSHLVRPAQVTGILLPLRNRRVALLAVFSAL HHHHHHCCCCCCCCCCHHHHCCHHHCCCHHHHCCCCHHHHEEEEECCCCHHHHHHHHHHH RENPFWSKPTTQQQRFQYLWLALWAAGGVAELAYLAVPILFLCTGWMPVPAFDRVFFAWF HCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LPYALLGRLTWLLAFPPSLWGAAWQSERQTGSQFFQSIQALVQAVRGVPPYPEQPSQLAL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GPQALAIVLTLLAMGVGSLRFAGNWDPTWPELLFGLVWAFYNLMVLTVRPDDHDFAGFAL CHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEE RSHNPAAEETTDALSNS ECCCCCHHHHHHHHCCC >Mature Secondary Structure MRSRAVQVYLFRGVGLLHLIAGVAYLYWRISEGLTGLGSLLFWGAELYVWLAAVGFILSR CCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHH YPQVPQEGVPAPEVLRRAFFQLPRVDVLVLRQRDSVEATRQTVLSALRLDYPWERLFVHI CCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCHHHHHHHH VDRVEDAEMAKVARAIPCEYWSCPSPTTDPLAYMLGSGQLQGEYLLLLHPGHFVEPDFLW HHHHCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCCCCCCCEEEEECCCCCCCHHHHH QTLPLFYDFPERAPIANATGFVQATLRTLGQPRAVHPLQQLLAVGSQGYQAAPLLGSGCL HHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCEECCCCCCCHH IRRAALEGIPQIDIRRPVQLGCQMHCRGWQSHLVRPAQVTGILLPLRNRRVALLAVFSAL HHHHHHCCCCCCCCCCHHHHCCHHHCCCHHHHCCCCHHHHEEEEECCCCHHHHHHHHHHH RENPFWSKPTTQQQRFQYLWLALWAAGGVAELAYLAVPILFLCTGWMPVPAFDRVFFAWF HCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH LPYALLGRLTWLLAFPPSLWGAAWQSERQTGSQFFQSIQALVQAVRGVPPYPEQPSQLAL HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GPQALAIVLTLLAMGVGSLRFAGNWDPTWPELLFGLVWAFYNLMVLTVRPDDHDFAGFAL CHHHHHHHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCEEE RSHNPAAEETTDALSNS ECCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11677608; 12644504 [H]