| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606616
Identifier: 86606616
GI number: 86606616
Start: 1989186
End: 1989647
Strand: Reverse
Name: 86606616
Synonym: CYA_1970
Alternate gene names: NA
Gene position: 1989647-1989186 (Counterclockwise)
Preceding gene: 86606617
Following gene: 86606608
Centisome position: 67.84
GC content: 58.87
Gene sequence:
>462_bases ATGAGTCAGCCCAAGGGTTTCAGCCAATCCAAGCCAGAGAAGAAACCGGCCAAGGCCAACACGGCCAAGCGCAAGGAAGC CGCCAAACGCTACGACGAGCTGAAAGCCAAGGGGATGCCGGAGTTCGCCATTTTTGCCCGGCGCCGCCAAGCTGAGCCCG GCAAACCCAACCCCTGGCTGCCCGTGGGATCCCTGGCGGTCAGTCGCTCCAGCGCCATCCACCAGGCCATCTTCCAAAAC GAGGAAGAGCTCAAAAAAGCAGCCGTCCGCCTCTTTCCCCGTCTTAGCAAAGTCAAAGACGAGCTGGAGTTTGGCTTTCG CCTTAAGGACAAAGAGTTTCAAGACGAGCCGATTCAGGTGGCAGTTCGGCCCCAGCCTTCGCCCCTTCAGAGCTGGATAG ACAGGGTGCGCAAGTGGCTGGGCCTGGGCAAAAGAACTACCCAAGCCTCCAAGAAAGGCTAA
Upstream 100 bases:
>100_bases CCAAGGCTTTGTAAGTATAGCATGCCATGCATGGCATCTTCCCGCGGGCGGGAGTCGTTCTGCGCTAAGCTATGGGGATC CACCGTTGCCCTACTGGAGT
Downstream 100 bases:
>100_bases GCCGTGGCAAAGGCTTTGGGTAGCCAGCTCAAAATCAAGGGGTTGACAATCTCTGGGCGCTCGTCGTGGGGGCAATGGCC CGTATCGGGAAGAGGGAAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 153; Mature: 152
Protein sequence:
>153_residues MSQPKGFSQSKPEKKPAKANTAKRKEAAKRYDELKAKGMPEFAIFARRRQAEPGKPNPWLPVGSLAVSRSSAIHQAIFQN EEELKKAAVRLFPRLSKVKDELEFGFRLKDKEFQDEPIQVAVRPQPSPLQSWIDRVRKWLGLGKRTTQASKKG
Sequences:
>Translated_153_residues MSQPKGFSQSKPEKKPAKANTAKRKEAAKRYDELKAKGMPEFAIFARRRQAEPGKPNPWLPVGSLAVSRSSAIHQAIFQN EEELKKAAVRLFPRLSKVKDELEFGFRLKDKEFQDEPIQVAVRPQPSPLQSWIDRVRKWLGLGKRTTQASKKG >Mature_152_residues SQPKGFSQSKPEKKPAKANTAKRKEAAKRYDELKAKGMPEFAIFARRRQAEPGKPNPWLPVGSLAVSRSSAIHQAIFQNE EELKKAAVRLFPRLSKVKDELEFGFRLKDKEFQDEPIQVAVRPQPSPLQSWIDRVRKWLGLGKRTTQASKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17409; Mature: 17278
Theoretical pI: Translated: 11.15; Mature: 11.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQPKGFSQSKPEKKPAKANTAKRKEAAKRYDELKAKGMPEFAIFARRRQAEPGKPNPWL CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC PVGSLAVSRSSAIHQAIFQNEEELKKAAVRLFPRLSKVKDELEFGFRLKDKEFQDEPIQV CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE AVRPQPSPLQSWIDRVRKWLGLGKRTTQASKKG EECCCCCHHHHHHHHHHHHHCCCCHHCHHCCCC >Mature Secondary Structure SQPKGFSQSKPEKKPAKANTAKRKEAAKRYDELKAKGMPEFAIFARRRQAEPGKPNPWL CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC PVGSLAVSRSSAIHQAIFQNEEELKKAAVRLFPRLSKVKDELEFGFRLKDKEFQDEPIQV CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEE AVRPQPSPLQSWIDRVRKWLGLGKRTTQASKKG EECCCCCHHHHHHHHHHHHHCCCCHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA