| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606596
Identifier: 86606596
GI number: 86606596
Start: 1962899
End: 1963336
Strand: Reverse
Name: 86606596
Synonym: CYA_1950
Alternate gene names: NA
Gene position: 1963336-1962899 (Counterclockwise)
Preceding gene: 86606597
Following gene: 86606595
Centisome position: 66.94
GC content: 62.56
Gene sequence:
>438_bases ATGCCCGTCTATACTCAAGCGATTGAAATTGCCGCTGGCGTGGCCCAGGTGGAGCGCTGTCTAATCGATCCAGCGCTGAT GCGGCGCTGGCTCAACCCCCTGTTGAGCTGTGAGGCGCTGGGATCCCCCACTGGGCAACTGGGCAGCCGCTACCGCTTTT TCCTGCGCCTGCCGCTGGTTTCCCCCAGCCTAGACTGCGTGATCGCCGAGCGGGCCGAGGGCCTGGTGCAGTGGCAGTTT GAGGGTTTTTTTCAGGGCACCGACCGCTGGGAATGTTGCCCCCAGCCGCTGGGAACGCTATTGGTAAACCGCTTTGAGTT TTGCATCCCCAACCCTTGGGTGGCGGCAGGGTTCTATCTGGTGGCAGCGGAGCTGACCCGGCACGACATGCGGGCACAAC TGCGACGGCTAAAGGCAGTGGCCGAGGCTTTGGGTTAG
Upstream 100 bases:
>100_bases CGGGCCGGATCAGGTGGAGTATCGCGATATCCTGATTTTGCTGAGTACCGTCGTCCCTGGCGGCGAAGCGCAGCCTGCCG CTGCAGCCGCTCCCTAGAGC
Downstream 100 bases:
>100_bases GCTGGTGGCAGGTAGTAAAGAAACGTAAAAAATGGCAATGACCAGCAACAGCAGCCTGTTCAACCGTCGCTTTTTCGACA ACTTCATCCCCCAGCCGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 145; Mature: 144
Protein sequence:
>145_residues MPVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLVSPSLDCVIAERAEGLVQWQF EGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYLVAAELTRHDMRAQLRRLKAVAEALG
Sequences:
>Translated_145_residues MPVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLVSPSLDCVIAERAEGLVQWQF EGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYLVAAELTRHDMRAQLRRLKAVAEALG >Mature_144_residues PVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLVSPSLDCVIAERAEGLVQWQFE GFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYLVAAELTRHDMRAQLRRLKAVAEALG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16297; Mature: 16166
Theoretical pI: Translated: 7.05; Mature: 7.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLV CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCC SPSLDCVIAERAEGLVQWQFEGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYL CCCHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH VAAELTRHDMRAQLRRLKAVAEALG HHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure PVYTQAIEIAAGVAQVERCLIDPALMRRWLNPLLSCEALGSPTGQLGSRYRFFLRLPLV CCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEECCC SPSLDCVIAERAEGLVQWQFEGFFQGTDRWECCPQPLGTLLVNRFEFCIPNPWVAAGFYL CCCHHHHHHHHHCCEEEEEECCEECCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH VAAELTRHDMRAQLRRLKAVAEALG HHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA