The gene/protein map for NC_003212 is currently unavailable.
Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606597

Identifier: 86606597

GI number: 86606597

Start: 1963340

End: 1963903

Strand: Reverse

Name: 86606597

Synonym: CYA_1951

Alternate gene names: NA

Gene position: 1963903-1963340 (Counterclockwise)

Preceding gene: 86606598

Following gene: 86606596

Centisome position: 66.96

GC content: 65.07

Gene sequence:

>564_bases
ATGAGAGGACATTTTTGCCCAGGTCAGGTGCAACTTCTGGCTTGGCTGTCGCTAGCGTTGTTGGCTGCCTGTCGCCCTTG
GCCAGACGCATCTCCTTCCGAAGCTGCCCCCCCGGATCCGGTGCTGCGCCACATCGGCGAAGATGGCACCCATTTTGAGG
CTTCCGTGGGCGATACCCGCGCTCTCCCTCCCCACTTCCCGCACCAGTTGCGCTTGCCCGACGCCACCGTCATCTCTTCG
GGGCAAATTTGGGATCAGGAAGGAGGGCTTGCCTCCCTGATTTTGCAGACCTCTCAACCTCTCTCGGAGATCGCCGCCTA
CTACCGCCGCACCCTCTGGGGCCGGGGCTGGGATCTCCTCTCCGATCTCGAGCAGGCCGGCGGCATCCGCACGCTGGTGT
TCGAGTCTCCCCCTCGCCCCGACAGGCCGCCCCAGCAGGCGGTCATCCAAGTGGGATCCCCCCGCCGCGGGCCGGATCAG
GTGGAGTATCGCGATATCCTGATTTTGCTGAGTACCGTCGTCCCTGGCGGCGAAGCGCAGCCTGCCGCTGCAGCCGCTCC
CTAG

Upstream 100 bases:

>100_bases
TGCCGCTTGTGCAGCTCGAGGGGTCCTGCTATCCCTGCTAACGGGTTGTGGGGAGGAATGGGGATCCGCTATAACCCACT
GAGGGATCCCTGGCTATGCG

Downstream 100 bases:

>100_bases
AGCATGCCCGTCTATACTCAAGCGATTGAAATTGCCGCTGGCGTGGCCCAGGTGGAGCGCTGTCTAATCGATCCAGCGCT
GATGCGGCGCTGGCTCAACC

Product: lipoprotein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MRGHFCPGQVQLLAWLSLALLAACRPWPDASPSEAAPPDPVLRHIGEDGTHFEASVGDTRALPPHFPHQLRLPDATVISS
GQIWDQEGGLASLILQTSQPLSEIAAYYRRTLWGRGWDLLSDLEQAGGIRTLVFESPPRPDRPPQQAVIQVGSPRRGPDQ
VEYRDILILLSTVVPGGEAQPAAAAAP

Sequences:

>Translated_187_residues
MRGHFCPGQVQLLAWLSLALLAACRPWPDASPSEAAPPDPVLRHIGEDGTHFEASVGDTRALPPHFPHQLRLPDATVISS
GQIWDQEGGLASLILQTSQPLSEIAAYYRRTLWGRGWDLLSDLEQAGGIRTLVFESPPRPDRPPQQAVIQVGSPRRGPDQ
VEYRDILILLSTVVPGGEAQPAAAAAP
>Mature_187_residues
MRGHFCPGQVQLLAWLSLALLAACRPWPDASPSEAAPPDPVLRHIGEDGTHFEASVGDTRALPPHFPHQLRLPDATVISS
GQIWDQEGGLASLILQTSQPLSEIAAYYRRTLWGRGWDLLSDLEQAGGIRTLVFESPPRPDRPPQQAVIQVGSPRRGPDQ
VEYRDILILLSTVVPGGEAQPAAAAAP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20212; Mature: 20212

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGHFCPGQVQLLAWLSLALLAACRPWPDASPSEAAPPDPVLRHIGEDGTHFEASVGDTR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCC
ALPPHFPHQLRLPDATVISSGQIWDQEGGLASLILQTSQPLSEIAAYYRRTLWGRGWDLL
CCCCCCCCEEECCCCEEECCCCEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
SDLEQAGGIRTLVFESPPRPDRPPQQAVIQVGSPRRGPDQVEYRDILILLSTVVPGGEAQ
HHHHHHCCEEEEEECCCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PAAAAAP
CCCCCCC
>Mature Secondary Structure
MRGHFCPGQVQLLAWLSLALLAACRPWPDASPSEAAPPDPVLRHIGEDGTHFEASVGDTR
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCEEECCCCCCC
ALPPHFPHQLRLPDATVISSGQIWDQEGGLASLILQTSQPLSEIAAYYRRTLWGRGWDLL
CCCCCCCCEEECCCCEEECCCCEECCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH
SDLEQAGGIRTLVFESPPRPDRPPQQAVIQVGSPRRGPDQVEYRDILILLSTVVPGGEAQ
HHHHHHCCEEEEEECCCCCCCCCHHHHHEECCCCCCCCCCHHHHHHHHHHHHHCCCCCCC
PAAAAAP
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA