| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606585
Identifier: 86606585
GI number: 86606585
Start: 1950384
End: 1951052
Strand: Reverse
Name: 86606585
Synonym: CYA_1939
Alternate gene names: NA
Gene position: 1951052-1950384 (Counterclockwise)
Preceding gene: 86606586
Following gene: 86606581
Centisome position: 66.53
GC content: 66.22
Gene sequence:
>669_bases TTGAGGGTTAAATCCACTCCGGCTTCCCGGGATCCCAATCGCTGGCTGAGGCGGCTGCCTTTGGTGACCGGCCTTCTGGG CAGCGTCCTTGTGCTGGCCAATCGCCTGCTGTTTACGCCGGAGTTGCTGGCCAGCCAGTCCCGCTCCGACGCCTTGGGGA TCCTCCTCAGCGCTGTTTTGATCTTGACCGGCCTGCTGTGGCAGCAGATCCAGCCGCGTCCTCCCCAGGCTGCCCCCCTG CAGGGAAGTCCAGGTTGCGACTGGCACCCGGATCTGTCCGAGAGGGAAAAACTGGAGCTGGCCTGGGCTTCCCACACCCT GCTCAGCACCACCGCCGCCCGCACCGTGGTGATCTGGGTGGAGGGGCGCACCCTGCTGCAGCGGGGGATCCTGGCCAGCC CCGGCCACTTGCCCTCCCTGCAGCTTCAGGGCACCCTGCAGCAGGTATTGGAGACACGTCAGCCCCTCTACCTGGGGGAT CTGAGATTTTTCCCCGCCCGCGCCGAGTTCGACGGCCTGTTGCCCCCCGGATCCCAGGCAGTTCTCTGCCAGCCCATCGG CCAGAGGGGATGCCTCATTTTGGGCAGCGACAGGCCGCGCAGCTTCAGCCGCCAGGAGCGGGCCTGGGTTGCCGCCATCG CCGACAAACTGGAAGCCCTATTTGCCTAG
Upstream 100 bases:
>100_bases AAGAGCCCGCCAAGAGCGCCTCGGCATCTGGAGCCGCCTCTGACGCCTTGGATAGCTCTAGACTGGGTTTACTGGGCACT CTGAGAGACGTCTGCCTGCT
Downstream 100 bases:
>100_bases CTGATACATTTACGCTGAACACTGCTGAGCATTACTGCTCAGCGGTGAAGCGATAGCATTCTGTCCGTTTCCGTTGTCAC TACGCGATGCTGACGCGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 222; Mature: 222
Protein sequence:
>222_residues MRVKSTPASRDPNRWLRRLPLVTGLLGSVLVLANRLLFTPELLASQSRSDALGILLSAVLILTGLLWQQIQPRPPQAAPL QGSPGCDWHPDLSEREKLELAWASHTLLSTTAARTVVIWVEGRTLLQRGILASPGHLPSLQLQGTLQQVLETRQPLYLGD LRFFPARAEFDGLLPPGSQAVLCQPIGQRGCLILGSDRPRSFSRQERAWVAAIADKLEALFA
Sequences:
>Translated_222_residues MRVKSTPASRDPNRWLRRLPLVTGLLGSVLVLANRLLFTPELLASQSRSDALGILLSAVLILTGLLWQQIQPRPPQAAPL QGSPGCDWHPDLSEREKLELAWASHTLLSTTAARTVVIWVEGRTLLQRGILASPGHLPSLQLQGTLQQVLETRQPLYLGD LRFFPARAEFDGLLPPGSQAVLCQPIGQRGCLILGSDRPRSFSRQERAWVAAIADKLEALFA >Mature_222_residues MRVKSTPASRDPNRWLRRLPLVTGLLGSVLVLANRLLFTPELLASQSRSDALGILLSAVLILTGLLWQQIQPRPPQAAPL QGSPGCDWHPDLSEREKLELAWASHTLLSTTAARTVVIWVEGRTLLQRGILASPGHLPSLQLQGTLQQVLETRQPLYLGD LRFFPARAEFDGLLPPGSQAVLCQPIGQRGCLILGSDRPRSFSRQERAWVAAIADKLEALFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24398; Mature: 24398
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRVKSTPASRDPNRWLRRLPLVTGLLGSVLVLANRLLFTPELLASQSRSDALGILLSAVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHH ILTGLLWQQIQPRPPQAAPLQGSPGCDWHPDLSEREKLELAWASHTLLSTTAARTVVIWV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE EGRTLLQRGILASPGHLPSLQLQGTLQQVLETRQPLYLGDLRFFPARAEFDGLLPPGSQA CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECEEECCCCCCCCCCCCCCCCE VLCQPIGQRGCLILGSDRPRSFSRQERAWVAAIADKLEALFA EEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRVKSTPASRDPNRWLRRLPLVTGLLGSVLVLANRLLFTPELLASQSRSDALGILLSAVL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHHH ILTGLLWQQIQPRPPQAAPLQGSPGCDWHPDLSEREKLELAWASHTLLSTTAARTVVIWV HHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEE EGRTLLQRGILASPGHLPSLQLQGTLQQVLETRQPLYLGDLRFFPARAEFDGLLPPGSQA CCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECEEECCCCCCCCCCCCCCCCE VLCQPIGQRGCLILGSDRPRSFSRQERAWVAAIADKLEALFA EEECCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA