Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606581

Identifier: 86606581

GI number: 86606581

Start: 1946705

End: 1947118

Strand: Reverse

Name: 86606581

Synonym: CYA_1935

Alternate gene names: NA

Gene position: 1947118-1946705 (Counterclockwise)

Preceding gene: 86606585

Following gene: 86606580

Centisome position: 66.39

GC content: 60.87

Gene sequence:

>414_bases
ATGCCCAACTTGGCCCAAAAAGGGCTGGTGGGCCTGATCTGGGCCTGTACTTGGATCCCTGTCTTGGGCATTTCCCTTGC
CGTAGCCCAAACCCCGGCCACCTCTCTGGTTTTGACCGATGAACAGGTCGCCAAGTACGCCCGCATCGTCCTGGAGATGG
AGCCCCACCGACAACAGGCCCAGCAGCGCTCCCAGGCCACCGCGGATCCGGCCAGCAAAGATCAAATCCGGCGGGAGTTC
ATTCGCACCGCCACCGAGATCATCACCCGCCACGGCATGACCGTGCCCGAATACAACCGCATTACCTTGTGGATTCGCTC
CGAAGAAGGCAAAACCCTCCGACATCGCATCGAAGCCGAAATCCTGCGCCTGCAAAGCGGGGATCCCAGCGTGAGCCCTA
GCCCCAAACCCTAA

Upstream 100 bases:

>100_bases
TCCCAAAAGCGCCAGCAACCCTGTTGAAGACCAGTTATCGGGTGGGGAGATAGCAGCGGTGTCAGGTCAAGCAAGTCGGA
GACGGTGGACAGCATTCTCC

Downstream 100 bases:

>100_bases
CCCCCCTTGGATCCCCTGCAGCGCTTTGGCCTGGATGTGACGGAGGACGGAAGATAGCGGTAGGCTGGAAGCGGAGGTCA
GTGCTCGTCCGTAGAGAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MPNLAQKGLVGLIWACTWIPVLGISLAVAQTPATSLVLTDEQVAKYARIVLEMEPHRQQAQQRSQATADPASKDQIRREF
IRTATEIITRHGMTVPEYNRITLWIRSEEGKTLRHRIEAEILRLQSGDPSVSPSPKP

Sequences:

>Translated_137_residues
MPNLAQKGLVGLIWACTWIPVLGISLAVAQTPATSLVLTDEQVAKYARIVLEMEPHRQQAQQRSQATADPASKDQIRREF
IRTATEIITRHGMTVPEYNRITLWIRSEEGKTLRHRIEAEILRLQSGDPSVSPSPKP
>Mature_136_residues
PNLAQKGLVGLIWACTWIPVLGISLAVAQTPATSLVLTDEQVAKYARIVLEMEPHRQQAQQRSQATADPASKDQIRREFI
RTATEIITRHGMTVPEYNRITLWIRSEEGKTLRHRIEAEILRLQSGDPSVSPSPKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15377; Mature: 15246

Theoretical pI: Translated: 9.78; Mature: 9.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPNLAQKGLVGLIWACTWIPVLGISLAVAQTPATSLVLTDEQVAKYARIVLEMEPHRQQA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCHHHHH
QQRSQATADPASKDQIRREFIRTATEIITRHGMTVPEYNRITLWIRSEEGKTLRHRIEAE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
ILRLQSGDPSVSPSPKP
HHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
PNLAQKGLVGLIWACTWIPVLGISLAVAQTPATSLVLTDEQVAKYARIVLEMEPHRQQA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHHHHHHCCCHHHHH
QQRSQATADPASKDQIRREFIRTATEIITRHGMTVPEYNRITLWIRSEEGKTLRHRIEAE
HHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCHHHHHHHHHH
ILRLQSGDPSVSPSPKP
HHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA