| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606580
Identifier: 86606580
GI number: 86606580
Start: 1946054
End: 1946593
Strand: Reverse
Name: 86606580
Synonym: CYA_1934
Alternate gene names: NA
Gene position: 1946593-1946054 (Counterclockwise)
Preceding gene: 86606581
Following gene: 86606577
Centisome position: 66.37
GC content: 60.56
Gene sequence:
>540_bases ATGAACGAGCCTATGTCGCCGTCAGTACGGGTGGCTGTCGAGCGCATGAAGTCTCGCTTGCGCCTGACGCGCCGCTTCGG GTTCTGGTTTCAGGCGGTTCTGGGGGCAACAGCTCTGCTGCTCTGGCTGGGATTTTTGGTTGGCCAGAATACCCTCTATC GCGACGACTCGACGGGGGCCTTTATCGCCTTCTGGTTTACCCTGTTTACCCTTCTAACCCTGGCAGCCGGTCTCTTCTTT AACTGGCGCTACCTGATCCAGGCGGAGCGCCGCTCAGTATCCGCCGCTACCCCAAGCCAGTTGGATCTGCCCAAGCAGTT GCAATGGGTTACCTATGTCAGCCTGACCGGCGCTTTCTTGGCCCTCATCGCTATGGAGGCGCAGGTGGGAGAGCTGCTGG TGCGGCTGTTTACCCGCACGCTGAGCACCCAGACGGCAGGAGTGCTGCTGCTGGCTGCCAATATCAACGTTACCTTTGCC CACTTCGTCTGCTTGGCAGGGGTGCTCTGGATTACCGGCGCCCTCGACCGCGAGCCCTGA
Upstream 100 bases:
>100_bases TCCCCTGCAGCGCTTTGGCCTGGATGTGACGGAGGACGGAAGATAGCGGTAGGCTGGAAGCGGAGGTCAGTGCTCGTCCG TAGAGAGCGGGGGGAGAGCG
Downstream 100 bases:
>100_bases ACCCCAGCCAGCCAGTCTCAGCTTTGCAAGGCAGAGAATCAGGCCTGCGGCGCAGCGGCCTGCCCCAAACCTGCCCCAAC TAAAACTATCCCCCCGCCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 179
Protein sequence:
>179_residues MNEPMSPSVRVAVERMKSRLRLTRRFGFWFQAVLGATALLLWLGFLVGQNTLYRDDSTGAFIAFWFTLFTLLTLAAGLFF NWRYLIQAERRSVSAATPSQLDLPKQLQWVTYVSLTGAFLALIAMEAQVGELLVRLFTRTLSTQTAGVLLLAANINVTFA HFVCLAGVLWITGALDREP
Sequences:
>Translated_179_residues MNEPMSPSVRVAVERMKSRLRLTRRFGFWFQAVLGATALLLWLGFLVGQNTLYRDDSTGAFIAFWFTLFTLLTLAAGLFF NWRYLIQAERRSVSAATPSQLDLPKQLQWVTYVSLTGAFLALIAMEAQVGELLVRLFTRTLSTQTAGVLLLAANINVTFA HFVCLAGVLWITGALDREP >Mature_179_residues MNEPMSPSVRVAVERMKSRLRLTRRFGFWFQAVLGATALLLWLGFLVGQNTLYRDDSTGAFIAFWFTLFTLLTLAAGLFF NWRYLIQAERRSVSAATPSQLDLPKQLQWVTYVSLTGAFLALIAMEAQVGELLVRLFTRTLSTQTAGVLLLAANINVTFA HFVCLAGVLWITGALDREP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20037; Mature: 20037
Theoretical pI: Translated: 10.53; Mature: 10.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPMSPSVRVAVERMKSRLRLTRRFGFWFQAVLGATALLLWLGFLVGQNTLYRDDSTGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCH FIAFWFTLFTLLTLAAGLFFNWRYLIQAERRSVSAATPSQLDLPKQLQWVTYVSLTGAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALIAMEAQVGELLVRLFTRTLSTQTAGVLLLAANINVTFAHFVCLAGVLWITGALDREP HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MNEPMSPSVRVAVERMKSRLRLTRRFGFWFQAVLGATALLLWLGFLVGQNTLYRDDSTGA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCH FIAFWFTLFTLLTLAAGLFFNWRYLIQAERRSVSAATPSQLDLPKQLQWVTYVSLTGAFL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHH ALIAMEAQVGELLVRLFTRTLSTQTAGVLLLAANINVTFAHFVCLAGVLWITGALDREP HHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA