| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606534
Identifier: 86606534
GI number: 86606534
Start: 1895866
End: 1895994
Strand: Reverse
Name: 86606534
Synonym: CYA_1887
Alternate gene names: NA
Gene position: 1895994-1895866 (Counterclockwise)
Preceding gene: 86606536
Following gene: 86606533
Centisome position: 64.65
GC content: 52.71
Gene sequence:
>129_bases ATGGGATCCAAACCCCGTTCTGCTTCAATGATCCAAGACCGCTGTTGCCAGCAGGGAGGGCAAACCGATCCAGCTAGGGG AGGATCCCATCACCTTTCTCCAAAGTTCACTTTGGACAACCTCATCTAG
Upstream 100 bases:
>100_bases GGGTGGACAATTCTTGAAAAACGGGTCAACAGGGGTAACAACCGGATCCCACCGTTCTACAGAACTCCCCCCACGTCGGA AAAAGCTGTATTGAGACGAG
Downstream 100 bases:
>100_bases AGCCAGCGGGATCCCTGTCGCAACCTTTTCTCTGCCGGTTCGATCGGCTTCTGCTGAGAATGCTGCCGCCAGACAGCTTG ACAGAGGCATCGGCGTTAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 42; Mature: 41
Protein sequence:
>42_residues MGSKPRSASMIQDRCCQQGGQTDPARGGSHHLSPKFTLDNLI
Sequences:
>Translated_42_residues MGSKPRSASMIQDRCCQQGGQTDPARGGSHHLSPKFTLDNLI >Mature_41_residues GSKPRSASMIQDRCCQQGGQTDPARGGSHHLSPKFTLDNLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4527; Mature: 4396
Theoretical pI: Translated: 8.83; Mature: 8.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 9.5 %Cys+Met (Translated Protein) 4.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKPRSASMIQDRCCQQGGQTDPARGGSHHLSPKFTLDNLI CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GSKPRSASMIQDRCCQQGGQTDPARGGSHHLSPKFTLDNLI CCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA