| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86606469
Identifier: 86606469
GI number: 86606469
Start: 1823895
End: 1824095
Strand: Reverse
Name: 86606469
Synonym: CYA_1818
Alternate gene names: NA
Gene position: 1824095-1823895 (Counterclockwise)
Preceding gene: 86606470
Following gene: 86606468
Centisome position: 62.2
GC content: 53.23
Gene sequence:
>201_bases ATGAAAGTCATCCTGCACGAAAGTGCCTACGGGCATTTGATGGTCTACGTTCCCAAAAAAGATCTGGAAGAATCGGTTGT GGCCACCCGTTCAGAGGCCGGGGAAACCATTTTCACCTTGAGCAACGGTTGGGAATTGTCCATCCCGGAGCTGCCGGAGC CTTTATCTCTGCCCAAGACGGTAGAGGCCAAACGCCTCTAG
Upstream 100 bases:
>100_bases CCTTTCTACAACGGTTTTACGTCTATGCCGTCCACTGCTTGGCCAAAGGCTTGGTGGTGGGGTGCCGTGCCCAAGAGCTG GAACTTGTGGAGAAAGGGCT
Downstream 100 bases:
>100_bases CCAACGGTTGGCTGAACAATTCAAGCAATTCTATTCCTATCGGCTCATCCCCGAAAGGGCTGAGAGAATGGGTTGAACTC AGCTCCAACAAGCTCTAGAT
Product: NifT/FixU family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 66; Mature: 66
Protein sequence:
>66_residues MKVILHESAYGHLMVYVPKKDLEESVVATRSEAGETIFTLSNGWELSIPELPEPLSLPKTVEAKRL
Sequences:
>Translated_66_residues MKVILHESAYGHLMVYVPKKDLEESVVATRSEAGETIFTLSNGWELSIPELPEPLSLPKTVEAKRL >Mature_66_residues MKVILHESAYGHLMVYVPKKDLEESVVATRSEAGETIFTLSNGWELSIPELPEPLSLPKTVEAKRL
Specific function: Unknown
COG id: COG5554
COG function: function code Q; Nitrogen fixation protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7380; Mature: 7380
Theoretical pI: Translated: 5.02; Mature: 5.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVILHESAYGHLMVYVPKKDLEESVVATRSEAGETIFTLSNGWELSIPELPEPLSLPKT CEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCC VEAKRL CCCCCC >Mature Secondary Structure MKVILHESAYGHLMVYVPKKDLEESVVATRSEAGETIFTLSNGWELSIPELPEPLSLPKT CEEEECCCCCCEEEEEECCCCCHHHHHHCCCCCCCEEEEECCCCEEECCCCCCCCCCCCC VEAKRL CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA