Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is yhjX [H]

Identifier: 86606468

GI number: 86606468

Start: 1822540

End: 1823742

Strand: Reverse

Name: yhjX [H]

Synonym: CYA_1817

Alternate gene names: 86606468

Gene position: 1823742-1822540 (Counterclockwise)

Preceding gene: 86606469

Following gene: 86606466

Centisome position: 62.19

GC content: 58.6

Gene sequence:

>1203_bases
ATGGGGAGATGGCTTTTTATCCTCCAGGGGCTCCTGGTTCTTCTTTGCCTGGGAACCGTCTATTCCTGGAGCATTTTCCG
CAAGCCCCTGGAAACAGAGCTGGGGATTGGGGCCAGTGAGAGCCTGCTGCCCTACACCGTTGCCCTCGTGTTTTACGCTA
CCCTCATGCCCATCACAGGGTTTGTCATCCCCCGCTGGGGATCCCGCCGAGTACTGGCTCTGGGGGGCAGCTTGGTGGGT
TTGGGCTATGGGCTGGCCAGCTTCGCCCCTTCTATTGGGTGGATCACCCTCTGCTATGGGGTGATTGCCGGCAGCGGTGT
GGGAATAGCCTATGGAGTGCCAATGGCCGTGGCAGCCCGTTGGTTCCCGGATCGCAAGGGATTGGCGGTGGGATCCACCA
TTGTCGGCTTTGGCCTATCCCCCCTGCTTACCGCTCCTCTAGCCAACCGCTTGATCGAGGCGCTGGGGGTTCGACCTACG
CTGCTGATTTTGGGGATCCTCTTCGCGGCAGTGATCCTGGGGATCGCAACCCAACTGAGATTTCCTCCTCCCGATTGGAT
CCTTTCCTCACCTTTTCCAAGAAAATCCACGAATGGCCCAGATCGCTCTCCGTTGACTTCTCGGCGCTCTCTCCCTCTGC
TGAGGAACCCCTCCTTCTATGGCCTGTGGATCTGCTATGCCATCGGCACTCTGATCGGTTTAAGCGCCATTGGGATTTCT
GGTCCTGTGGGGGAAGAGCTGATCGGCCTGGATCCCACTGCGGCTGCCAACAGCGTGGCTCTCTTCGCCATTTTCAACGG
GATCAGCCGTCCTCTGTTTGGCTGGTTGGCCGATCGCTTACATCCCCATCAGGTCACTACGGGCTCCTATGGGCTGATCC
TGCTGGCCTGTGGGCTAATGCTCCTGCCTCCCCAGGGATCCCTTCTGGGCTATTGGGTAGCCTTTTCCTTGCTTTGGTTT
TGCCTGGGGGGGTGGCTGGCCATGGCTCCCGCCCTGACCCTGCGCTTGTTTGATCCCGAACGCTACGCCCAGAACTACGG
CATTGTGTTTACCGCCTATGGAGTTGGGGCCTTGGTGGGAACGATGATCGCGGGGCAAATTCGCGATAGGCTGGGCAGCT
ATAGCTATACCTTTTATGGGATGGCCGCCTTGGCGGTGGTGGGGATCTGGGTGGCCAACGTTTTTTTGAAAGAGAAGTTG
TAG

Upstream 100 bases:

>100_bases
GAAAGGGCTGAGAGAATGGGTTGAACTCAGCTCCAACAAGCTCTAGATACCCATGAAAAGGGTTGGATTCCCCGTTACTT
TGTATGGACAACCGGCCCAT

Downstream 100 bases:

>100_bases
GAGCTTCAAGCCAGCGGGCACAGCAGGGATCCCATCAGCAGGGGCAGCAATCCCCTACTTCATACCCTCCACTGCAGGGC
TGGGTGAACCAACTTAAAGA

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MGRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITGFVIPRWGSRRVLALGGSLVG
LGYGLASFAPSIGWITLCYGVIAGSGVGIAYGVPMAVAARWFPDRKGLAVGSTIVGFGLSPLLTAPLANRLIEALGVRPT
LLILGILFAAVILGIATQLRFPPPDWILSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
GPVGEELIGLDPTAAANSVALFAIFNGISRPLFGWLADRLHPHQVTTGSYGLILLACGLMLLPPQGSLLGYWVAFSLLWF
CLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVGTMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANVFLKEKL

Sequences:

>Translated_400_residues
MGRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITGFVIPRWGSRRVLALGGSLVG
LGYGLASFAPSIGWITLCYGVIAGSGVGIAYGVPMAVAARWFPDRKGLAVGSTIVGFGLSPLLTAPLANRLIEALGVRPT
LLILGILFAAVILGIATQLRFPPPDWILSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
GPVGEELIGLDPTAAANSVALFAIFNGISRPLFGWLADRLHPHQVTTGSYGLILLACGLMLLPPQGSLLGYWVAFSLLWF
CLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVGTMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANVFLKEKL
>Mature_399_residues
GRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITGFVIPRWGSRRVLALGGSLVGL
GYGLASFAPSIGWITLCYGVIAGSGVGIAYGVPMAVAARWFPDRKGLAVGSTIVGFGLSPLLTAPLANRLIEALGVRPTL
LILGILFAAVILGIATQLRFPPPDWILSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGISG
PVGEELIGLDPTAAANSVALFAIFNGISRPLFGWLADRLHPHQVTTGSYGLILLACGLMLLPPQGSLLGYWVAFSLLWFC
LGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVGTMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANVFLKEKL

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI291621700, Length=402, Percent_Identity=24.6268656716418, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI34916028, Length=162, Percent_Identity=30.2469135802469, Blast_Score=74, Evalue=2e-13,
Organism=Escherichia coli, GI1789969, Length=377, Percent_Identity=27.0557029177719, Blast_Score=147, Evalue=1e-36,
Organism=Drosophila melanogaster, GI281360217, Length=191, Percent_Identity=29.3193717277487, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28573971, Length=191, Percent_Identity=29.3193717277487, Blast_Score=72, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR004741 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42790; Mature: 42659

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
FVIPRWGSRRVLALGGSLVGLGYGLASFAPSIGWITLCYGVIAGSGVGIAYGVPMAVAAR
EEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
WFPDRKGLAVGSTIVGFGLSPLLTAPLANRLIEALGVRPTLLILGILFAAVILGIATQLR
HCCCCCCCEECCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
FPPPDWILSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GPVGEELIGLDPTAAANSVALFAIFNGISRPLFGWLADRLHPHQVTTGSYGLILLACGLM
CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHH
LLPPQGSLLGYWVAFSLLWFCLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCEEEEEHHHHHHHH
TMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANVFLKEKL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GRWLFILQGLLVLLCLGTVYSWSIFRKPLETELGIGASESLLPYTVALVFYATLMPITG
CHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHC
FVIPRWGSRRVLALGGSLVGLGYGLASFAPSIGWITLCYGVIAGSGVGIAYGVPMAVAAR
EEECCCCCCEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHCCHHHHHHH
WFPDRKGLAVGSTIVGFGLSPLLTAPLANRLIEALGVRPTLLILGILFAAVILGIATQLR
HCCCCCCCEECCHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCC
FPPPDWILSSPFPRKSTNGPDRSPLTSRRSLPLLRNPSFYGLWICYAIGTLIGLSAIGIS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
GPVGEELIGLDPTAAANSVALFAIFNGISRPLFGWLADRLHPHQVTTGSYGLILLACGLM
CCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHHH
LLPPQGSLLGYWVAFSLLWFCLGGWLAMAPALTLRLFDPERYAQNYGIVFTAYGVGALVG
EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECHHHHHCCCCEEEEEHHHHHHHH
TMIAGQIRDRLGSYSYTFYGMAALAVVGIWVANVFLKEKL
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]