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The map label for this gene is prc-1

Identifier: 86606448

GI number: 86606448

Start: 1795708

End: 1797021

Strand: Reverse

Name: prc-1

Synonym: CYA_1795

Alternate gene names: 86606448

Gene position: 1797021-1795708 (Counterclockwise)

Preceding gene: 86606452

Following gene: 86606447

Centisome position: 61.27

GC content: 64.23

Gene sequence:

>1314_bases
ATGATTGCGCAGAAGCCGAGATCTGGGGAAAGCAGTTGCAGAGGGTTGGGGATCGGATGGGGGTTACGCCAGGCTGTCCG
AGTTTTGTTGCTAGGGTGCCTGCTCTGGGCGAGTTTGGGCATTGGCGCCTGTCAGGTGCAGGCCAGCCGCTGGGGGGAAG
AGCAGCAACTGCTGGCGCAGGCGTGGGCCTATGTGGATCGGGCCTACGTGGATCCGGGTTTCAACGGACAGAACTGGTGG
CAGGTGCGCCAGCGCTTTCTCTCTCGGCCCCTGAAGGATCGGCAAGAGACCTACCGGGCCATCGAGGAGATGCTGGCAAC
TCTGGGGGATCCCTACACCCGCTTTTTGGACAGGGAGCACTACCTCAGCCTGCAGACTTCCACTGCTGGCGAGTTGAGCG
GCGTCGGCCTCCAGATTGCCATCGACGGGCAGGGGGCAGTACGGGTCATCGCCCCAATGGAGGGGACTCCTGCCGAGCGG
GCCGGGATCCAACCTCAAGATGAGATCCTGGCGGTGGATCAGGTGCCAGTGGCAGGGCTGAGCTTGGATGAGGTGGCAGA
ACGCATGCGCGGCCCCAGCGGCACAACCGTTAGCCTACGGCTAAGGCGGCAGGAGCGCATCTGGGAGGTGGAGCTGGTGC
GGCAGTCCATCCTGATCAACCCGGTGCGCACCGGTTTTTTCAAGCTGCCCCAGGGGGAGGTAGCCTACATCCGCCTCAGC
CAGTTTAACGGCAATGCCGCCGCTCAAGTGCGTCAGGCCATCCAGGCCGCAGAAGCGCGAGGAGTGCGGGGCTACATCCT
CGATCTGCGCAACAACCCCGGAGGGTTACTGCAGGCGGCCATTGAGATTGCTCGCTTTTGGATCCCCAAAGGCGACATCG
TGCGAGTGACGGATCGCTACGGCATTCAGGACGGCATTCCCGCCACCGGCGAAGTCCTCACGGCAGCCCCCTTGGTCGTC
TTAGTGAACCAGGGCAGTGCCAGCGCCAGCGAAGTCTTGGCGGGGGCGTTGCAGGACAGCGGACGGGCGCAACTGGTGGG
AACGCGCACCTTCGGCAAGGGGCTGATCCAATCCCTGCTGGAGCTGGCGGACGGCTCGGGGCTGGCCGTGACCACTGCCA
AATACCTCACCCCCAACGGCCACGACATTCATCGCCAAGGGATCCAGCCCGATGTGGAGGTGGCCGCGGGCCCTGTTCCC
CTGACGGCAGAAAGCCTGGGCGGCCCTGAGGATGGGCAGTTGCAGCGGGCTTTGGAAGTGTTGGGGGCGACTTTGTCGGT
GGCCCAGGGGATCCCAGCGGCAGCTAACACCTGA

Upstream 100 bases:

>100_bases
GAGACAGGGATCCCTACACCAACAGCCCAAACGCCTGCTGATGTCTCATCTTGTTCACGTTTCTTAGTATTTCTTAGCTT
CTTCTTCAGTTTGGGATCCG

Downstream 100 bases:

>100_bases
GGGGGAGAAGGGGAGTGCCTGTTTGTCTGCGATTCGTTTTAGGATCGGGTTTAGCCGTCCACTTGGCCCTGCTCTCGATC
CCTCTGGCATGAATGCCCTG

Product: C-terminal processing peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MIAQKPRSGESSCRGLGIGWGLRQAVRVLLLGCLLWASLGIGACQVQASRWGEEQQLLAQAWAYVDRAYVDPGFNGQNWW
QVRQRFLSRPLKDRQETYRAIEEMLATLGDPYTRFLDREHYLSLQTSTAGELSGVGLQIAIDGQGAVRVIAPMEGTPAER
AGIQPQDEILAVDQVPVAGLSLDEVAERMRGPSGTTVSLRLRRQERIWEVELVRQSILINPVRTGFFKLPQGEVAYIRLS
QFNGNAAAQVRQAIQAAEARGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVRVTDRYGIQDGIPATGEVLTAAPLVV
LVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGLAVTTAKYLTPNGHDIHRQGIQPDVEVAAGPVP
LTAESLGGPEDGQLQRALEVLGATLSVAQGIPAAANT

Sequences:

>Translated_437_residues
MIAQKPRSGESSCRGLGIGWGLRQAVRVLLLGCLLWASLGIGACQVQASRWGEEQQLLAQAWAYVDRAYVDPGFNGQNWW
QVRQRFLSRPLKDRQETYRAIEEMLATLGDPYTRFLDREHYLSLQTSTAGELSGVGLQIAIDGQGAVRVIAPMEGTPAER
AGIQPQDEILAVDQVPVAGLSLDEVAERMRGPSGTTVSLRLRRQERIWEVELVRQSILINPVRTGFFKLPQGEVAYIRLS
QFNGNAAAQVRQAIQAAEARGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVRVTDRYGIQDGIPATGEVLTAAPLVV
LVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGLAVTTAKYLTPNGHDIHRQGIQPDVEVAAGPVP
LTAESLGGPEDGQLQRALEVLGATLSVAQGIPAAANT
>Mature_437_residues
MIAQKPRSGESSCRGLGIGWGLRQAVRVLLLGCLLWASLGIGACQVQASRWGEEQQLLAQAWAYVDRAYVDPGFNGQNWW
QVRQRFLSRPLKDRQETYRAIEEMLATLGDPYTRFLDREHYLSLQTSTAGELSGVGLQIAIDGQGAVRVIAPMEGTPAER
AGIQPQDEILAVDQVPVAGLSLDEVAERMRGPSGTTVSLRLRRQERIWEVELVRQSILINPVRTGFFKLPQGEVAYIRLS
QFNGNAAAQVRQAIQAAEARGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVRVTDRYGIQDGIPATGEVLTAAPLVV
LVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLLELADGSGLAVTTAKYLTPNGHDIHRQGIQPDVEVAAGPVP
LTAESLGGPEDGQLQRALEVLGATLSVAQGIPAAANT

Specific function: Cleavage of the 16 C-terminal residues from the D1 precursor of photosystem II. May be involved in protection of the bacterium from thermal and osmotic stresses [H]

COG id: COG0793

COG function: function code M; Periplasmic protease

Gene ontology:

Cell location: Secreted (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PDZ (DHR) domain [H]

Homologues:

Organism=Escherichia coli, GI1788134, Length=312, Percent_Identity=31.4102564102564, Blast_Score=125, Evalue=8e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001478
- InterPro:   IPR005151
- InterPro:   IPR004447 [H]

Pfam domain/function: PF00595 PDZ; PF03572 Peptidase_S41 [H]

EC number: =3.4.21.102 [H]

Molecular weight: Translated: 46945; Mature: 46945

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50106 PDZ

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAQKPRSGESSCRGLGIGWGLRQAVRVLLLGCLLWASLGIGACQVQASRWGEEQQLLAQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHH
AWAYVDRAYVDPGFNGQNWWQVRQRFLSRPLKDRQETYRAIEEMLATLGDPYTRFLDREH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHHH
YLSLQTSTAGELSGVGLQIAIDGQGAVRVIAPMEGTPAERAGIQPQDEILAVDQVPVAGL
EEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCHHHEEEECCCCCCCC
SLDEVAERMRGPSGTTVSLRLRRQERIWEVELVRQSILINPVRTGFFKLPQGEVAYIRLS
CHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCHHHHCEEECCCCCEEEEEEE
QFNGNAAAQVRQAIQAAEARGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVRVTDRY
ECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
GIQDGIPATGEVLTAAPLVVLVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLL
CCCCCCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH
ELADGSGLAVTTAKYLTPNGHDIHRQGIQPDVEVAAGPVPLTAESLGGPEDGQLQRALEV
HHCCCCCEEEEEEEEECCCCCHHHHCCCCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHH
LGATLSVAQGIPAAANT
HHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MIAQKPRSGESSCRGLGIGWGLRQAVRVLLLGCLLWASLGIGACQVQASRWGEEQQLLAQ
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEHHHCCHHHHHHHH
AWAYVDRAYVDPGFNGQNWWQVRQRFLSRPLKDRQETYRAIEEMLATLGDPYTRFLDREH
HHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCHHHHHHCHHH
YLSLQTSTAGELSGVGLQIAIDGQGAVRVIAPMEGTPAERAGIQPQDEILAVDQVPVAGL
EEEEECCCCCCCCCCEEEEEECCCCCEEEEECCCCCCHHHCCCCCHHHEEEECCCCCCCC
SLDEVAERMRGPSGTTVSLRLRRQERIWEVELVRQSILINPVRTGFFKLPQGEVAYIRLS
CHHHHHHHHCCCCCCEEEEEEECHHHHHHHHHHHHHHHHCHHHHCEEECCCCCEEEEEEE
QFNGNAAAQVRQAIQAAEARGVRGYILDLRNNPGGLLQAAIEIARFWIPKGDIVRVTDRY
ECCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEECCC
GIQDGIPATGEVLTAAPLVVLVNQGSASASEVLAGALQDSGRAQLVGTRTFGKGLIQSLL
CCCCCCCCCCCHHHHCCEEEEEECCCCCHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHH
ELADGSGLAVTTAKYLTPNGHDIHRQGIQPDVEVAAGPVPLTAESLGGPEDGQLQRALEV
HHCCCCCEEEEEEEEECCCCCHHHHCCCCCCHHHCCCCCCCCHHHCCCCCCHHHHHHHHH
LGATLSVAQGIPAAANT
HHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8034700; 8058761; 8590279; 8905231 [H]