| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is lysN [H]
Identifier: 86606364
GI number: 86606364
Start: 1717994
End: 1719319
Strand: Reverse
Name: lysN [H]
Synonym: CYA_1709
Alternate gene names: 86606364
Gene position: 1719319-1717994 (Counterclockwise)
Preceding gene: 86606365
Following gene: 86606360
Centisome position: 58.62
GC content: 63.05
Gene sequence:
>1326_bases TTGGCCCTGGGCGGAACGCCAACAAACCCTGCTCAGCTTGGCTGGTTTGGGCCATGTCCTGTGGATGGGGGTGCTAGCAG CTTGGCTTTGGGATCCCCAGATGAACCTGTTGCAGCAAAGCGCCCGTTGGGGCCTGGTGGCCCTGCCCTTTTTGTGCCTG AGTGCCGGTGGCGTCTTGGCGGAGATCCCCTGCCGGGGCTGGCGACAGTTTTTGGGATCCCTGCTCTTAGCCAGCTCGTT CTTGTTATCGTGGCAAGCGTTGGCCTGAGTTCTTCTCCTGCCTTGAAGATTCGGATGCGGCCCCTCTTAGAGACCCTGTT CGCCCGGCGGGCCCAGGCGGTGATCCCGCCTCCTGTTGGCGCGGAGATCGCTGGGGCGGTGCCGGTAGTAACCAGTTTTA CCTTTGGCCTGGCGGATCCGCGGTTGTTTCCCAAGGCCGACCTGGCGCGGGCGACAGCGGAGGTGTTGGCGGAAGATGGG GATGCTGCCCTCAATTACGGCGGCACCTTTGCCGGGTTGATCGAGGTGGTGCAGCAGTTGATGCGGGCCAGAGGGGTGGA GGCGCAGCCGGAAAACCTCTTGATCGGCTATGGCTCTGGGCAGATCCTTGGCCTCTTGCCCCAGGTCTTTGTGGAGCCGG GGGATGTGGTGATCGTGGAGGGGCCCACCTTCATGGGGGCGGTCAGCCGTTTTGCGGCGGCAGGGGCGCGTCTGATCTCG ATCCCGGTGGATGGGGAGGGCATGGTGGTGGATCGCCTGGAAGAGGTGTTGCGCGAGCTAGCCCGCCAAGGGATCCCACC CCGCTTTATCTACACCATTCCCACCTTTCACAACCCTAGGGGCTGCACCCTCTCTTGGCCGCGGCGGCAGAAGCTGCTGC AGTTGGCGGCTGAATACGGCGTGGTGGTGGTGGAGGACGAGGCCTACTACGACCTGCGCTTTGTCGGGGATCCCTTGCCC AGTTTGGCCGCGCTGGATAAAGAGGGCTGGGTTCTGCACGTGGGCACCTTTTCCAAGATTGTGGCGCCGGGGGTGCGGGT GGGCTGGGCCTGTGGCCATCCCGAGATCATCCGCCGCTTGGAGATGTTTCGCAGCGAGGGATCCCTGGGGCCTTTTTTGG GCCGGGTGGTGGCCCGATACTGCGGGGAAGGCCGCCTAGAGAGCCACATTCAGCTTTTGATCCGCCGTTACCGAGAAAAG TGCCACCTGATGTTGGAGGCCATCGCTCAATGTTTTCCCCCTGAAGTCAAGGTGGAGGCCCCTGGGGGTGGATTCTTTAT CTGGTGCGAGCTGCCCCCTCCCCTGAGTGCCAACACCTTGCTGTAG
Upstream 100 bases:
>100_bases TTCCTACGGCGACGGTGTCCTATTCGCTCACCAGCCAAAGCGGCCTGGCTGTTCTGGCCACCTTGATGTTGCCCTTGGGG CTGGCCTTGGTGCGGCTGGG
Downstream 100 bases:
>100_bases GCCACCCGAGCGCTGGGGGTAACTTTCTTGCCGGGTACCCACTGCTTTGCTGATGGCCAAGGGGATCACGCCCTGCGCCT CGCCTTCAGCTACCAACCGG
Product: aminotransferase, classes I and II
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 441; Mature: 440
Protein sequence:
>441_residues MALGGTPTNPAQLGWFGPCPVDGGASSLALGSPDEPVAAKRPLGPGGPALFVPECRWRLGGDPLPGLATVFGIPALSQLV LVIVASVGLSSSPALKIRMRPLLETLFARRAQAVIPPPVGAEIAGAVPVVTSFTFGLADPRLFPKADLARATAEVLAEDG DAALNYGGTFAGLIEVVQQLMRARGVEAQPENLLIGYGSGQILGLLPQVFVEPGDVVIVEGPTFMGAVSRFAAAGARLIS IPVDGEGMVVDRLEEVLRELARQGIPPRFIYTIPTFHNPRGCTLSWPRRQKLLQLAAEYGVVVVEDEAYYDLRFVGDPLP SLAALDKEGWVLHVGTFSKIVAPGVRVGWACGHPEIIRRLEMFRSEGSLGPFLGRVVARYCGEGRLESHIQLLIRRYREK CHLMLEAIAQCFPPEVKVEAPGGGFFIWCELPPPLSANTLL
Sequences:
>Translated_441_residues MALGGTPTNPAQLGWFGPCPVDGGASSLALGSPDEPVAAKRPLGPGGPALFVPECRWRLGGDPLPGLATVFGIPALSQLV LVIVASVGLSSSPALKIRMRPLLETLFARRAQAVIPPPVGAEIAGAVPVVTSFTFGLADPRLFPKADLARATAEVLAEDG DAALNYGGTFAGLIEVVQQLMRARGVEAQPENLLIGYGSGQILGLLPQVFVEPGDVVIVEGPTFMGAVSRFAAAGARLIS IPVDGEGMVVDRLEEVLRELARQGIPPRFIYTIPTFHNPRGCTLSWPRRQKLLQLAAEYGVVVVEDEAYYDLRFVGDPLP SLAALDKEGWVLHVGTFSKIVAPGVRVGWACGHPEIIRRLEMFRSEGSLGPFLGRVVARYCGEGRLESHIQLLIRRYREK CHLMLEAIAQCFPPEVKVEAPGGGFFIWCELPPPLSANTLL >Mature_440_residues ALGGTPTNPAQLGWFGPCPVDGGASSLALGSPDEPVAAKRPLGPGGPALFVPECRWRLGGDPLPGLATVFGIPALSQLVL VIVASVGLSSSPALKIRMRPLLETLFARRAQAVIPPPVGAEIAGAVPVVTSFTFGLADPRLFPKADLARATAEVLAEDGD AALNYGGTFAGLIEVVQQLMRARGVEAQPENLLIGYGSGQILGLLPQVFVEPGDVVIVEGPTFMGAVSRFAAAGARLISI PVDGEGMVVDRLEEVLRELARQGIPPRFIYTIPTFHNPRGCTLSWPRRQKLLQLAAEYGVVVVEDEAYYDLRFVGDPLPS LAALDKEGWVLHVGTFSKIVAPGVRVGWACGHPEIIRRLEMFRSEGSLGPFLGRVVARYCGEGRLESHIQLLIRRYREKC HLMLEAIAQCFPPEVKVEAPGGGFFIWCELPPPLSANTLL
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=329, Percent_Identity=25.8358662613982, Blast_Score=124, Evalue=2e-28, Organism=Homo sapiens, GI33469970, Length=329, Percent_Identity=25.8358662613982, Blast_Score=124, Evalue=2e-28, Organism=Escherichia coli, GI1787710, Length=324, Percent_Identity=32.4074074074074, Blast_Score=155, Evalue=6e-39, Organism=Escherichia coli, GI1790797, Length=291, Percent_Identity=30.2405498281787, Blast_Score=118, Evalue=6e-28, Organism=Escherichia coli, GI1788722, Length=255, Percent_Identity=24.3137254901961, Blast_Score=65, Evalue=1e-11, Organism=Saccharomyces cerevisiae, GI6321236, Length=175, Percent_Identity=31.4285714285714, Blast_Score=102, Evalue=1e-22, Organism=Saccharomyces cerevisiae, GI6321000, Length=190, Percent_Identity=27.8947368421053, Blast_Score=75, Evalue=2e-14, Organism=Saccharomyces cerevisiae, GI6321929, Length=203, Percent_Identity=26.1083743842365, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI21356535, Length=301, Percent_Identity=26.2458471760797, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 47095; Mature: 46964
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALGGTPTNPAQLGWFGPCPVDGGASSLALGSPDEPVAAKRPLGPGGPALFVPECRWRLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC GDPLPGLATVFGIPALSQLVLVIVASVGLSSSPALKIRMRPLLETLFARRAQAVIPPPVG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCC AEIAGAVPVVTSFTFGLADPRLFPKADLARATAEVLAEDGDAALNYGGTFAGLIEVVQQL CHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHH MRARGVEAQPENLLIGYGSGQILGLLPQVFVEPGDVVIVEGPTFMGAVSRFAAAGARLIS HHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEE IPVDGEGMVVDRLEEVLRELARQGIPPRFIYTIPTFHNPRGCTLSWPRRQKLLQLAAEYG EEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC VVVVEDEAYYDLRFVGDPLPSLAALDKEGWVLHVGTFSKIVAPGVRVGWACGHPEIIRRL EEEEECCCEEEEEECCCCCCHHHHCCCCCCEEEECCHHHHHCCCCEEEECCCCHHHHHHH EMFRSEGSLGPFLGRVVARYCGEGRLESHIQLLIRRYREKCHLMLEAIAQCFPPEVKVEA HHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC PGGGFFIWCELPPPLSANTLL CCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure ALGGTPTNPAQLGWFGPCPVDGGASSLALGSPDEPVAAKRPLGPGGPALFVPECRWRLG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCHHHCCC GDPLPGLATVFGIPALSQLVLVIVASVGLSSSPALKIRMRPLLETLFARRAQAVIPPPVG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCCCC AEIAGAVPVVTSFTFGLADPRLFPKADLARATAEVLAEDGDAALNYGGTFAGLIEVVQQL CHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCEECCCCHHHHHHHHHHHH MRARGVEAQPENLLIGYGSGQILGLLPQVFVEPGDVVIVEGPTFMGAVSRFAAAGARLIS HHHCCCCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHCCCEEEE IPVDGEGMVVDRLEEVLRELARQGIPPRFIYTIPTFHNPRGCTLSWPRRQKLLQLAAEYG EEECCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHCC VVVVEDEAYYDLRFVGDPLPSLAALDKEGWVLHVGTFSKIVAPGVRVGWACGHPEIIRRL EEEEECCCEEEEEECCCCCCHHHHCCCCCCEEEECCHHHHHCCCCEEEECCCCHHHHHHH EMFRSEGSLGPFLGRVVARYCGEGRLESHIQLLIRRYREKCHLMLEAIAQCFPPEVKVEA HHHHCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEC PGGGFFIWCELPPPLSANTLL CCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA