| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606360
Identifier: 86606360
GI number: 86606360
Start: 1712348
End: 1713088
Strand: Reverse
Name: 86606360
Synonym: CYA_1704
Alternate gene names: NA
Gene position: 1713088-1712348 (Counterclockwise)
Preceding gene: 86606364
Following gene: 86606359
Centisome position: 58.41
GC content: 65.18
Gene sequence:
>741_bases TTGCCTCTGGAAAGCGGGATCCAAAAACAGGTCTCCGCCCCGGCACCGGCTCCCTTGGTGAAGTGGCTGCAAGAGCAAAT AGAGGCCGCCAACCGGCGGGATCTGGAGGAGGTGATGGCCGGCTATAGCCCCGACTTCCGCCACCGCGACGGCCTGGATC GGCAGGGGGTGGAAAGGGCCATTCGCAAGCTGTGGGAGGCCCATCCCCAGCTGACCTACGCAGCGGAAATTCTCTCTTGG CGGCGGCTAGGCCCTGAGATCGTGGCCGAGATCGCCAGCCAAGTGCAGGGATCCCAATCTTCAGGGCGGGGGGAGTTTCA GGTGCAGGCCTCTGCCCTGGTGCGCAACCGCTACCGCCCGAATGCGGCCAAGCCGGAGCAACTGCTGTTGGTGGAGCAGG AAGTGCTGCGGGAGGCCAGCACCCTCACCTCCGGCTCGGCGCCCCCCACCGTCACCTTCAGGTTGCCGGAGGTGGTCAAG CCGGGATCCCCCTACTCGCTGCAGGCCATTGTGGCCGAGCCCCTTGCCCAATCTTTGCTGTTGGGCGCCGTCGAGGAGCA GCCCGTGGCTGCGGCCGGCTACTTAGATCTAACTTCGTTTGCCCTTGAACCTCTGCAGGCGGGCGGGCTCTTCCTGCAGG CAGATGCGCCGCCAGAAGCTGGCGCCCGCTGGCTCTCGGTGATGCTAGTCAACCAGAGTGGCCTTGTTGTCGAAAGCCGG CGCCTCGTCATTCAACCCTGA
Upstream 100 bases:
>100_bases GAGCTTCCAATCCACCCTTTCCCAACTGCTTGGGTTCCTTGCTCTGACTTTGAGCTGGGGGATCCCTTTGCCCAGCAAGG CAGCGGCCCAGGCTGCCCCC
Downstream 100 bases:
>100_bases GGGATCGACAGCCCTTAAGGACTCTTGACCTGGGTAGTTGTTGAGATCTTTTGGGCGAAGCTGAGATTTGAGAGGTCTGG AAGCCCTCGGAAGATTTCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 246; Mature: 245
Protein sequence:
>246_residues MPLESGIQKQVSAPAPAPLVKWLQEQIEAANRRDLEEVMAGYSPDFRHRDGLDRQGVERAIRKLWEAHPQLTYAAEILSW RRLGPEIVAEIASQVQGSQSSGRGEFQVQASALVRNRYRPNAAKPEQLLLVEQEVLREASTLTSGSAPPTVTFRLPEVVK PGSPYSLQAIVAEPLAQSLLLGAVEEQPVAAAGYLDLTSFALEPLQAGGLFLQADAPPEAGARWLSVMLVNQSGLVVESR RLVIQP
Sequences:
>Translated_246_residues MPLESGIQKQVSAPAPAPLVKWLQEQIEAANRRDLEEVMAGYSPDFRHRDGLDRQGVERAIRKLWEAHPQLTYAAEILSW RRLGPEIVAEIASQVQGSQSSGRGEFQVQASALVRNRYRPNAAKPEQLLLVEQEVLREASTLTSGSAPPTVTFRLPEVVK PGSPYSLQAIVAEPLAQSLLLGAVEEQPVAAAGYLDLTSFALEPLQAGGLFLQADAPPEAGARWLSVMLVNQSGLVVESR RLVIQP >Mature_245_residues PLESGIQKQVSAPAPAPLVKWLQEQIEAANRRDLEEVMAGYSPDFRHRDGLDRQGVERAIRKLWEAHPQLTYAAEILSWR RLGPEIVAEIASQVQGSQSSGRGEFQVQASALVRNRYRPNAAKPEQLLLVEQEVLREASTLTSGSAPPTVTFRLPEVVKP GSPYSLQAIVAEPLAQSLLLGAVEEQPVAAAGYLDLTSFALEPLQAGGLFLQADAPPEAGARWLSVMLVNQSGLVVESRR LVIQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26800; Mature: 26669
Theoretical pI: Translated: 4.98; Mature: 4.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLESGIQKQVSAPAPAPLVKWLQEQIEAANRRDLEEVMAGYSPDFRHRDGLDRQGVERA CCCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHH IRKLWEAHPQLTYAAEILSWRRLGPEIVAEIASQVQGSQSSGRGEFQVQASALVRNRYRP HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCC NAAKPEQLLLVEQEVLREASTLTSGSAPPTVTFRLPEVVKPGSPYSLQAIVAEPLAQSLL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHH LGAVEEQPVAAAGYLDLTSFALEPLQAGGLFLQADAPPEAGARWLSVMLVNQSGLVVESR HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHEEECCCCCEEECC RLVIQP CEEECC >Mature Secondary Structure PLESGIQKQVSAPAPAPLVKWLQEQIEAANRRDLEEVMAGYSPDFRHRDGLDRQGVERA CCCHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCCHHHHHHH IRKLWEAHPQLTYAAEILSWRRLGPEIVAEIASQVQGSQSSGRGEFQVQASALVRNRYRP HHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCEEEEHHHHHHHHCCCC NAAKPEQLLLVEQEVLREASTLTSGSAPPTVTFRLPEVVKPGSPYSLQAIVAEPLAQSLL CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHCCCCCCCHHHHHHHHHHHHHH LGAVEEQPVAAAGYLDLTSFALEPLQAGGLFLQADAPPEAGARWLSVMLVNQSGLVVESR HHHHCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHEEECCCCCEEECC RLVIQP CEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA