Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606247

Identifier: 86606247

GI number: 86606247

Start: 1593438

End: 1594466

Strand: Reverse

Name: 86606247

Synonym: CYA_1584

Alternate gene names: NA

Gene position: 1594466-1593438 (Counterclockwise)

Preceding gene: 86606250

Following gene: 86606246

Centisome position: 54.37

GC content: 57.82

Gene sequence:

>1029_bases
ATGGCACGTTTAGAACTCTCCCGGCGGGACTTCTGCCTGCGTTCTGGGGCTTTTGTGGCTGGCCTGATGGGGAGCCGCTG
GTTGGTTCGCGATGCCGCGGTGGCTCAAGGAACCAAGCTGAAGGTGGCCGGGGTTTATACGGTTCCCATTGAGCAGCAGT
GGGTGAGCCGGATCCATAAAGCCTTGATGACCGCCCAGGAGCGGGGGGATATTGACTATACCTGGTCGGAGTCAGTTTCC
AACACCGACTATCCACGGGTGCTGCGTCAGTATGCCGAGAGCGGCGTCCAACTGCTGGTGGGTGAGGTCTTTGGGGTGGA
GCGGGAAGCGCGGGAGGTGGCCAAAGACTATCCCAAGGTCAGCTTTTTGATGGGGTCCAGCCTCAAGCCGGATCCTGCCC
TGAGCAATTTTGCCGTGTTTGACAACTACATCCACGAGCCTTCCTATCTGACGGGAATGGTGGCCGGGGGGCTGACCCGC
TCCAAAATTATCGGCATGGTGGGGGGCTATCCCATTCCAGAGGTGAACCGCCTCATGAATGCTTTTATGGCAGGGGCGAG
GGAACTGCAGCCGGAGGTGAAGTTTTTGGTCACCTTTATCGGCAGTTGGTTTGATCCCCCCAAAGCCAAAGAGGCGGCTT
TTGCCCAAATTGATGCCGGCGCAGATATCCTTTACGCGGAGCGGTTTGGGGTATCTGATGCCGCCAAAGAGAGGGGCGTT
TTGGCCATCGGCAATGTGATCGATACCCAGCCGGACTACCCGGAAACGGTGGTGGTCAGCGCCCTGTGGCACATGGAACC
CACCATCGACAGAGCCATTGCCGCGGTGAAGGCCGGAGAGTTTAAGGCAGAGGACTACGGGATCTACAGCATGATGAAAT
ATGGGGGATCCAGCCTCTCCGACTGGGGAACCTTTGCCGACAAGGTTCCGGCTGAACTGAAAGCTAAGGTGATGCAGCGG
CAGGCAGAGATTCTGGCAGGGTCTTTTGTTGTAGCCATCGATGACAGCGAACCCAAGTCCACCCTCTGA

Upstream 100 bases:

>100_bases
CTCAAAAAATTGTATTTCAGGATACATATTTTCAGGGATCTCCCCCTTAGGATAAGCCGAGCAGTAACCCGATCTCGAAG
TAACCTCAACAGAAGCGACT

Downstream 100 bases:

>100_bases
AGCGCCTTTGGCCTTGAAGGTGGTGGGCATTACTAAGCGCTTTGGTGCTCTGCTGGCCAACGACCAGATTGATCTTGAGC
TGCGGGCCGGGGAGATTCTG

Product: Tat (twin-arginine translocation) pathway signal sequence/basic membrane protein

Products: NA

Alternate protein names: Bmp Family Protein; Basic Membrane Protein; Lipoprotein; Bmp Family Membrane Protein; ABC Transporter Periplasmic/Surface Lipoprotein; Outer Membrane Lipoprotein; ABC Transporter; Lipoprotein Periplasmic Protein; Basic Membrane Protein Family Protein; ABC Transporter Periplasmic Protein Surface Lipoprotein; Basic Membrane Lipoprotein Family; ABC Transporter Periplasmic Protein/Surface Lipoprotein; Twin-Arginine Translocation Pathway Signal; Membrane Lipoprotein; Tat Pathway Signal Sequence/Basic Membrane Protein; Surface Lipoprotein; Signal Peptide Protein; ABC Transporter Periplasmic Protein

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MARLELSRRDFCLRSGAFVAGLMGSRWLVRDAAVAQGTKLKVAGVYTVPIEQQWVSRIHKALMTAQERGDIDYTWSESVS
NTDYPRVLRQYAESGVQLLVGEVFGVEREAREVAKDYPKVSFLMGSSLKPDPALSNFAVFDNYIHEPSYLTGMVAGGLTR
SKIIGMVGGYPIPEVNRLMNAFMAGARELQPEVKFLVTFIGSWFDPPKAKEAAFAQIDAGADILYAERFGVSDAAKERGV
LAIGNVIDTQPDYPETVVVSALWHMEPTIDRAIAAVKAGEFKAEDYGIYSMMKYGGSSLSDWGTFADKVPAELKAKVMQR
QAEILAGSFVVAIDDSEPKSTL

Sequences:

>Translated_342_residues
MARLELSRRDFCLRSGAFVAGLMGSRWLVRDAAVAQGTKLKVAGVYTVPIEQQWVSRIHKALMTAQERGDIDYTWSESVS
NTDYPRVLRQYAESGVQLLVGEVFGVEREAREVAKDYPKVSFLMGSSLKPDPALSNFAVFDNYIHEPSYLTGMVAGGLTR
SKIIGMVGGYPIPEVNRLMNAFMAGARELQPEVKFLVTFIGSWFDPPKAKEAAFAQIDAGADILYAERFGVSDAAKERGV
LAIGNVIDTQPDYPETVVVSALWHMEPTIDRAIAAVKAGEFKAEDYGIYSMMKYGGSSLSDWGTFADKVPAELKAKVMQR
QAEILAGSFVVAIDDSEPKSTL
>Mature_341_residues
ARLELSRRDFCLRSGAFVAGLMGSRWLVRDAAVAQGTKLKVAGVYTVPIEQQWVSRIHKALMTAQERGDIDYTWSESVSN
TDYPRVLRQYAESGVQLLVGEVFGVEREAREVAKDYPKVSFLMGSSLKPDPALSNFAVFDNYIHEPSYLTGMVAGGLTRS
KIIGMVGGYPIPEVNRLMNAFMAGARELQPEVKFLVTFIGSWFDPPKAKEAAFAQIDAGADILYAERFGVSDAAKERGVL
AIGNVIDTQPDYPETVVVSALWHMEPTIDRAIAAVKAGEFKAEDYGIYSMMKYGGSSLSDWGTFADKVPAELKAKVMQRQ
AEILAGSFVVAIDDSEPKSTL

Specific function: Unknown

COG id: COG1744

COG function: function code R; Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37517; Mature: 37386

Theoretical pI: Translated: 5.13; Mature: 5.13

Prosite motif: PS00324 ASPARTOKINASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLELSRRDFCLRSGAFVAGLMGSRWLVRDAAVAQGTKLKVAGVYTVPIEQQWVSRIHK
CCCCCCCHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHH
ALMTAQERGDIDYTWSESVSNTDYPRVLRQYAESGVQLLVGEVFGVEREAREVAKDYPKV
HHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCE
SFLMGSSLKPDPALSNFAVFDNYIHEPSYLTGMVAGGLTRSKIIGMVGGYPIPEVNRLMN
EEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
AFMAGARELQPEVKFLVTFIGSWFDPPKAKEAAFAQIDAGADILYAERFGVSDAAKERGV
HHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEHHHCCCCHHHHHCCE
LAIGNVIDTQPDYPETVVVSALWHMEPTIDRAIAAVKAGEFKAEDYGIYSMMKYGGSSLS
EEECCHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH
DWGTFADKVPAELKAKVMQRQAEILAGSFVVAIDDSEPKSTL
HHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC
>Mature Secondary Structure 
ARLELSRRDFCLRSGAFVAGLMGSRWLVRDAAVAQGTKLKVAGVYTVPIEQQWVSRIHK
CCCCCCHHHHHHHCCCHHHHHHCCCHHHHHHHHHCCCEEEEEEEEECCCCHHHHHHHHH
ALMTAQERGDIDYTWSESVSNTDYPRVLRQYAESGVQLLVGEVFGVEREAREVAKDYPKV
HHHHHHHCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCE
SFLMGSSLKPDPALSNFAVFDNYIHEPSYLTGMVAGGLTRSKIIGMVGGYPIPEVNRLMN
EEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH
AFMAGARELQPEVKFLVTFIGSWFDPPKAKEAAFAQIDAGADILYAERFGVSDAAKERGV
HHHHHHHHHCHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCEEEHHHCCCCHHHHHCCE
LAIGNVIDTQPDYPETVVVSALWHMEPTIDRAIAAVKAGEFKAEDYGIYSMMKYGGSSLS
EEECCHHCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCH
DWGTFADKVPAELKAKVMQRQAEILAGSFVVAIDDSEPKSTL
HHHHHHHHCCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA