Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606210

Identifier: 86606210

GI number: 86606210

Start: 1553982

End: 1555208

Strand: Reverse

Name: 86606210

Synonym: CYA_1545

Alternate gene names: NA

Gene position: 1555208-1553982 (Counterclockwise)

Preceding gene: 86606211

Following gene: 86606209

Centisome position: 53.03

GC content: 62.75

Gene sequence:

>1227_bases
ATGCGTTCGCGAGCCATCCGAGAAGGGGCAGTGGGCCTGTTGATCTTGGCGGGGGCACTGGGCTTTGCCGGGCTGTTTTT
GTGGATCTACAACTTGCGCTTCGGCAGCCGCGGCTTTCGGTTCACCGTCACCTATCCCAATGTGGCCGGCCTGGCGGAAG
GCTCCAGCGTGCGGCTGCGGGGAGTAGCTGTGGGCCGGGTGGAGCGCATCGTGCCTCAGGCAGCTCAGGTGGAGGTCCAG
GTGGCCATCGACCAGCCCTTGATCATCCCCCGCGATGCTCTGTTTATTACCCAGCAAACAGGGTTGGTGGGGGAGACGGT
GGTGGACATCTTGCCTAGGGGGAGTGTCGAGGGGGCAGTGGGATCCCCCCTAGCTGCCGATTGCGACCGCAGCCAAATCA
TCTGCGATGGCGATGTGGTGGAGGGCAAACCGGGGGTGGATTTTGGCCAGTTGCTGATTCGCCTGGAGCGGTTGCTTGCA
CGGGTTGACGATGATGAGGTTTTTAGCACCCTTAACGCCACCCTAGAAGGGATCACCCGCGTTGCCGACAGCGTGGCCAA
CCTCTCGGAAACCCTGGAAGAGCGGGTGGCAGCCCTGCGCACCGAAGATCTGGACTTGTTGCAATTCACCGAGGCGGCTA
GAGCAGTGAGCCAAACTGCCGCAAGTCTCCAGGAGGCTGCCGACCAGTTCACGGCCCTGCTTCTAGAAAATCGCGCCTCG
CTCCGGGCCGCCCTAGAGAATATCCAGCAGGTGAGCGCCGATCTGGAGGCGATGTCGAGCGCGGTTCGCCCGCTGCTTAC
CGATCCGCAACTGCAGGAGGAGGTGCGCCAGATCCTAGTAGGGGCACGAGTAACGGCGGAGAACGCGGCCAAGGCCACTG
AGGATCTGCGGCAGCTTGCGGCTGCCCTAAGCGACCCGGGCACCCTAGCAACCTTGCGCCAAACCCTGGACTCCGCCCGC
ATCTCCTTTCAGAACGTGCAAAAGATCACGGCTGACATCGACGAGCTTACCGGGGATCCCCAGTTTCGCCGCGCCCTGCG
AGAGCTGGTGTTGGGGCTGAGCAACTTGGTTTCCAGCGCCCCTTCCGACAACGGGATTCAGCCCGCTGCCGTCCAAGTCG
CGCCCGTTTCTTTTACCCTCGCCCCTATGGGGCAGCAGCCGGTTCCCCAAGAGGAAGCCAAGATCCCTGCCGAGATCCGC
TCCCCTAGCAGCGGCAAAAGCCATTGA

Upstream 100 bases:

>100_bases
AGGGATCCGTGCAAGAGATCGAAACGTGCGACAACCCCTTTGTGCGGCAATTTTTCAGCGGTAGCGTAGAAGGGCCAATT
CGAGTGGCAGGGCAGGTGTG

Downstream 100 bases:

>100_bases
AGGGATCCCGAAGCTGGGGTAGGCTTTGCGGGTATAGGACGCCGCGCCGTCGACCAGGGTTGAGGTGTGAGGAATGTGTG
GCATTGTCGGCTATGTGGGC

Product: mce related protein

Products: NA

Alternate protein names: Mammalian Cell Entry Related Domain Protein; Mammalian Cell Entry Related Domain-Containing Protein; Methyl-Accepting Chemotaxis Sensory Transducer

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MRSRAIREGAVGLLILAGALGFAGLFLWIYNLRFGSRGFRFTVTYPNVAGLAEGSSVRLRGVAVGRVERIVPQAAQVEVQ
VAIDQPLIIPRDALFITQQTGLVGETVVDILPRGSVEGAVGSPLAADCDRSQIICDGDVVEGKPGVDFGQLLIRLERLLA
RVDDDEVFSTLNATLEGITRVADSVANLSETLEERVAALRTEDLDLLQFTEAARAVSQTAASLQEAADQFTALLLENRAS
LRAALENIQQVSADLEAMSSAVRPLLTDPQLQEEVRQILVGARVTAENAAKATEDLRQLAAALSDPGTLATLRQTLDSAR
ISFQNVQKITADIDELTGDPQFRRALRELVLGLSNLVSSAPSDNGIQPAAVQVAPVSFTLAPMGQQPVPQEEAKIPAEIR
SPSSGKSH

Sequences:

>Translated_408_residues
MRSRAIREGAVGLLILAGALGFAGLFLWIYNLRFGSRGFRFTVTYPNVAGLAEGSSVRLRGVAVGRVERIVPQAAQVEVQ
VAIDQPLIIPRDALFITQQTGLVGETVVDILPRGSVEGAVGSPLAADCDRSQIICDGDVVEGKPGVDFGQLLIRLERLLA
RVDDDEVFSTLNATLEGITRVADSVANLSETLEERVAALRTEDLDLLQFTEAARAVSQTAASLQEAADQFTALLLENRAS
LRAALENIQQVSADLEAMSSAVRPLLTDPQLQEEVRQILVGARVTAENAAKATEDLRQLAAALSDPGTLATLRQTLDSAR
ISFQNVQKITADIDELTGDPQFRRALRELVLGLSNLVSSAPSDNGIQPAAVQVAPVSFTLAPMGQQPVPQEEAKIPAEIR
SPSSGKSH
>Mature_408_residues
MRSRAIREGAVGLLILAGALGFAGLFLWIYNLRFGSRGFRFTVTYPNVAGLAEGSSVRLRGVAVGRVERIVPQAAQVEVQ
VAIDQPLIIPRDALFITQQTGLVGETVVDILPRGSVEGAVGSPLAADCDRSQIICDGDVVEGKPGVDFGQLLIRLERLLA
RVDDDEVFSTLNATLEGITRVADSVANLSETLEERVAALRTEDLDLLQFTEAARAVSQTAASLQEAADQFTALLLENRAS
LRAALENIQQVSADLEAMSSAVRPLLTDPQLQEEVRQILVGARVTAENAAKATEDLRQLAAALSDPGTLATLRQTLDSAR
ISFQNVQKITADIDELTGDPQFRRALRELVLGLSNLVSSAPSDNGIQPAAVQVAPVSFTLAPMGQQPVPQEEAKIPAEIR
SPSSGKSH

Specific function: Unknown

COG id: COG1463

COG function: function code Q; ABC-type transport system involved in resistance to organic solvents, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43557; Mature: 43557

Theoretical pI: Translated: 4.45; Mature: 4.45

Prosite motif: PS00018 EF_HAND_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSRAIREGAVGLLILAGALGFAGLFLWIYNLRFGSRGFRFTVTYPNVAGLAEGSSVRLR
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEE
GVAVGRVERIVPQAAQVEVQVAIDQPLIIPRDALFITQQTGLVGETVVDILPRGSVEGAV
EEHHHHHHHHCCHHHHEEEEEEECCCEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCC
GSPLAADCDRSQIICDGDVVEGKPGVDFGQLLIRLERLLARVDDDEVFSTLNATLEGITR
CCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VADSVANLSETLEERVAALRTEDLDLLQFTEAARAVSQTAASLQEAADQFTALLLENRAS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAALENIQQVSADLEAMSSAVRPLLTDPQLQEEVRQILVGARVTAENAAKATEDLRQLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AALSDPGTLATLRQTLDSARISFQNVQKITADIDELTGDPQFRRALRELVLGLSNLVSSA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PSDNGIQPAAVQVAPVSFTLAPMGQQPVPQEEAKIPAEIRSPSSGKSH
CCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCHHHCCCCCCCCC
>Mature Secondary Structure
MRSRAIREGAVGLLILAGALGFAGLFLWIYNLRFGSRGFRFTVTYPNVAGLAEGSSVRLR
CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCEEEE
GVAVGRVERIVPQAAQVEVQVAIDQPLIIPRDALFITQQTGLVGETVVDILPRGSVEGAV
EEHHHHHHHHCCHHHHEEEEEEECCCEECCCCCEEEEECCCCHHHHHHHHCCCCCCCCCC
GSPLAADCDRSQIICDGDVVEGKPGVDFGQLLIRLERLLARVDDDEVFSTLNATLEGITR
CCCCCCCCCCCEEEECCCEECCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
VADSVANLSETLEERVAALRTEDLDLLQFTEAARAVSQTAASLQEAADQFTALLLENRAS
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LRAALENIQQVSADLEAMSSAVRPLLTDPQLQEEVRQILVGARVTAENAAKATEDLRQLA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
AALSDPGTLATLRQTLDSARISFQNVQKITADIDELTGDPQFRRALRELVLGLSNLVSSA
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
PSDNGIQPAAVQVAPVSFTLAPMGQQPVPQEEAKIPAEIRSPSSGKSH
CCCCCCCCCEEEEEEEEEEECCCCCCCCCHHHCCCCHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA