| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is cysR [H]
Identifier: 86606206
GI number: 86606206
Start: 1550208
End: 1550846
Strand: Reverse
Name: cysR [H]
Synonym: CYA_1541
Alternate gene names: 86606206
Gene position: 1550846-1550208 (Counterclockwise)
Preceding gene: 86606209
Following gene: 86606202
Centisome position: 52.88
GC content: 63.07
Gene sequence:
>639_bases ATGCCTGAAACGATGCCCGGCCATTTTGCTGCCGGCCTGCCTACACGGGAGCGGCAATTGCTAGAAGACCTCTACCGAGG CCGCAGTTTATCTCCCTACAGTCCCGGCCAGGTCATCCCTTTGTTTCCCGAGGAGTGGGTGATCGTCTGTCGGGGTGTGG TGCAATTGACTACCCTCTATCCCAATGGCGGCGAGGCGCTGTTGGGATTTGCTGGCCCCTCCATGCCCCTGGGATCCCCG CTGACAATGTTGGATCCCTACCAAGCCAAGGCGTTGACGGCGGTTGACGTGTTGCGGCTGCCGGCAGCCGAGGTGGAAGC CTCAGCAACCCTGAGCCAGGGGCTGCTCAAGCAGTTGGTGCGGCGGTTGCGCCAAACCGAAGCGCTGCTGGCCTTGGCCG GGCGGCGGCGGGTGGAGGATCGGCTGCGCCAGTTGCTCTCCCTATTGGCGGTGGAGTTGGGATCCCCAATGGCGACGGGG GTGCGCCTGCAGGTGCGCCTCACCCACCAAGACTTGGCCAATGCCATCGGCACTACCCGCGTCACCATCACCCGTCTTTT GAACCGTTTCCGCCAGCAGGGCTGGATCGCGGTGGACAAAAACCGCCATCTCATCATCAAGCTGGCCCAAACGCCCTGA
Upstream 100 bases:
>100_bases TCCTCTACCCCAACTCAGCCGCGAAGCCAACCCCATGCTGTTATTGGTAGGGGAAAGCCCAACGACCAGTGTGCCCAGTT TGCCCTAGCGGAGCTAGCCT
Downstream 100 bases:
>100_bases CGGCTTTAAGCCTGGCGTTGGAGCTGTTGGAGGAGCCAGTTGGCGGCGGCGGTGTTGGTCTCGCTGGCCAGGCGTTCCAG CGCCTGCTCAAGCAGAGCTA
Product: Crp/FNR family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 212; Mature: 211
Protein sequence:
>212_residues MPETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLYPNGGEALLGFAGPSMPLGSP LTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLVRRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATG VRLQVRLTHQDLANAIGTTRVTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP
Sequences:
>Translated_212_residues MPETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLYPNGGEALLGFAGPSMPLGSP LTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLVRRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATG VRLQVRLTHQDLANAIGTTRVTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP >Mature_211_residues PETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLYPNGGEALLGFAGPSMPLGSPL TMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLVRRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATGV RLQVRLTHQDLANAIGTTRVTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP
Specific function: Probably regulates the expression of genes from the sulfate permease complex [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH crp-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018490 - InterPro: IPR001808 - InterPro: IPR012318 - InterPro: IPR014710 - InterPro: IPR018335 - InterPro: IPR011991 [H]
Pfam domain/function: PF00325 Crp [H]
EC number: NA
Molecular weight: Translated: 23386; Mature: 23255
Theoretical pI: Translated: 10.86; Mature: 10.86
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLY CCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHEEEC PNGGEALLGFAGPSMPLGSPLTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLV CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATGVRLQVRLTHQDLANAIGTTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCHH VTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP HHHHHHHHHHHHCCCEEEECCCEEEEEECCCC >Mature Secondary Structure PETMPGHFAAGLPTRERQLLEDLYRGRSLSPYSPGQVIPLFPEEWVIVCRGVVQLTTLY CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHHHHHHHHHEEEC PNGGEALLGFAGPSMPLGSPLTMLDPYQAKALTAVDVLRLPAAEVEASATLSQGLLKQLV CCCCCEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH RRLRQTEALLALAGRRRVEDRLRQLLSLLAVELGSPMATGVRLQVRLTHQDLANAIGTTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECHHHHHHHHCCHH VTITRLLNRFRQQGWIAVDKNRHLIIKLAQTP HHHHHHHHHHHHCCCEEEECCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231 [H]