| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606155
Identifier: 86606155
GI number: 86606155
Start: 1495536
End: 1496153
Strand: Reverse
Name: 86606155
Synonym: CYA_1488
Alternate gene names: NA
Gene position: 1496153-1495536 (Counterclockwise)
Preceding gene: 86606156
Following gene: 86606154
Centisome position: 51.02
GC content: 62.46
Gene sequence:
>618_bases GTGGAAAAAGCAGTTCGCGGAGCTTGCGGTTTGGCAGTTTGCCTTTGGCTAGTTAGTCTGGGATCCTTGTCGGCCCAGGC TGACCCCAGTGGCAGCCATTTCGCAGCGCCGCAGGACTCACGTCCTTATCCCCATGCCCTGGAGCCCACCAACCTGCCCT CACCCAGATCCCGTCTCACCCAACCGCTGGCCGGCTCTCAGGCTTCCACCCCCGCCCAAAACCAACCGGCCTCTCCCGAG ATAGAGCTATCGCCTTTTCCCGATTTCCCCCTCCTTAAGGAGTTGGATCCGCCCCTCCCCACCTTGGCCGACCTGGGCAT CCATTGGGATCGCCTGGCTCTGCTGCCCGACCTCGAGCTGGCCGAGGAAATGGATAGGGAGTTCAGCCGCCGCTTGGCCC GCCTGAACCGGCAGATTGCCAACCAACAAGAGCGCCTCTACCGCCTGTTGCAAACCTGGGACTCTGACGAGGCCGATATC CGTCAAATTCAGGCCCAACTGAGCCAGTTGCGCACAGAACGGGATCGCCTGGCGCTGGAACACCTGTTGCTGCTGCGGCA GTTGCAAGAGAACTTCGCCCTGCCTCTACCGGCCCGCTCTGCCGCCAGCTCTCCCTGA
Upstream 100 bases:
>100_bases AGATGCCTACTCAATTTTGTTTGAGACAACGCCGAACCTCGGCGACGAGGTGAGCTGGGAATGATTCTGAGCAGGCTTGA GAAAGATTGAGGAGTGGAGG
Downstream 100 bases:
>100_bases GGTGGGCCCAAGTTATGATCGGCAGAGGGCAACCACTGACGGAGCTGAGCGATGGCCCAAGTGCCCAGCAACCCAGAGAT CGAGCAGTTGGCCGCTGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 205; Mature: 205
Protein sequence:
>205_residues MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLTQPLAGSQASTPAQNQPASPE IELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLELAEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADI RQIQAQLSQLRTERDRLALEHLLLLRQLQENFALPLPARSAASSP
Sequences:
>Translated_205_residues MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLTQPLAGSQASTPAQNQPASPE IELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLELAEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADI RQIQAQLSQLRTERDRLALEHLLLLRQLQENFALPLPARSAASSP >Mature_205_residues MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLTQPLAGSQASTPAQNQPASPE IELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLELAEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADI RQIQAQLSQLRTERDRLALEHLLLLRQLQENFALPLPARSAASSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22845; Mature: 22845
Theoretical pI: Translated: 5.07; Mature: 5.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QPLAGSQASTPAQNQPASPEIELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLEL CCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHCCCHHH AEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDRLALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLLLLRQLQENFALPLPARSAASSP HHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MEKAVRGACGLAVCLWLVSLGSLSAQADPSGSHFAAPQDSRPYPHALEPTNLPSPRSRLT CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH QPLAGSQASTPAQNQPASPEIELSPFPDFPLLKELDPPLPTLADLGIHWDRLALLPDLEL CCCCCCCCCCCCCCCCCCCCEECCCCCCCCHHHHCCCCCCHHHHHCCCHHHHHHCCCHHH AEEMDREFSRRLARLNRQIANQQERLYRLLQTWDSDEADIRQIQAQLSQLRTERDRLALE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH HLLLLRQLQENFALPLPARSAASSP HHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA