| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606129
Identifier: 86606129
GI number: 86606129
Start: 1466743
End: 1467078
Strand: Reverse
Name: 86606129
Synonym: CYA_1461
Alternate gene names: NA
Gene position: 1467078-1466743 (Counterclockwise)
Preceding gene: 86606130
Following gene: 86606128
Centisome position: 50.02
GC content: 57.74
Gene sequence:
>336_bases ATGGAGCGGGCTGTTCTGGAGATGGTGAACGAGCTGCTGCTCCTGGAAAGCCAGCAGCGCTACTGCTCCTGTGAGAGATT CTGTCACGATGCCGCCGCCTTGGCCCTCAACAACCTCCAGCCCCGCTACACCACCAGTTTTGAAGGCTCCATATACACCC TGGAAGCCATCCAAGCAGATCAAGAGTTGCAGAGCCTGATTCGGCGGGAGGTGGGGAAGGCTATGGAGATAGTGGCGGCA AATCCCCGTTGCCCAGAGCCTGATTGCCCGCTGCAGCGCAACGTCGAGGCAGTAGAGTTAGAGCTGGCTCCTAGCGACAC TCGCAAACAAAACTAA
Upstream 100 bases:
>100_bases ACCGTCCTGTTTTTGGGAAAATGAGGACTGGCGGCGGGATCAGTGACATCGGGAGGCAGCCATGGAGGCACGCAAACCTC TGAAGAGGTTGGAAAATCAG
Downstream 100 bases:
>100_bases AGAATGGCTTTAATCGTCTCCTCTGCGCCGGTAGCCTTCCTCGGCCCTGTTGGAACCTACACGGAGTTGGCCGCTCTGCT CGCCTGTCCCGAGCAGCCCC
Product: competence protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 111; Mature: 111
Protein sequence:
>111_residues MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQADQELQSLIRREVGKAMEIVAA NPRCPEPDCPLQRNVEAVELELAPSDTRKQN
Sequences:
>Translated_111_residues MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQADQELQSLIRREVGKAMEIVAA NPRCPEPDCPLQRNVEAVELELAPSDTRKQN >Mature_111_residues MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQADQELQSLIRREVGKAMEIVAA NPRCPEPDCPLQRNVEAVELELAPSDTRKQN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12596; Mature: 12596
Theoretical pI: Translated: 4.37; Mature: 4.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 7.2 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 7.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQAD CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHCC QELQSLIRREVGKAMEIVAANPRCPEPDCPLQRNVEAVELELAPSDTRKQN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC >Mature Secondary Structure MERAVLEMVNELLLLESQQRYCSCERFCHDAAALALNNLQPRYTTSFEGSIYTLEAIQAD CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEHHHHHCC QELQSLIRREVGKAMEIVAANPRCPEPDCPLQRNVEAVELELAPSDTRKQN HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA