| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606091
Identifier: 86606091
GI number: 86606091
Start: 1430501
End: 1431175
Strand: Reverse
Name: 86606091
Synonym: CYA_1423
Alternate gene names: NA
Gene position: 1431175-1430501 (Counterclockwise)
Preceding gene: 86606092
Following gene: 86606090
Centisome position: 48.8
GC content: 59.85
Gene sequence:
>675_bases ATGGCAGCAGAGCAGCCTTTGGAGGTGGCTGTGGCTTTGACGATCGGATCCGTTTCTGCTTCTGGATCGACAACGGCTCG CCTGAGTTTGGCAGAGTACCTCAAGTATTCCGATGGCGGCGATACCCGCTATGAGTTGGTGGCGGGGGAGTTGGTGCCCA TGGCCCTTCCAACCGGACGGCATGTCCAGATCCAAAAGTTTCTCAGCCAGGTTTTTGAGGCGGAGATCGCCAGACGGCAG TTGCCTTGGACAACAATCCAGGGCGGCCTGGGGATCCAGTCGCCGCGGGGCAACCGCTGGGAAACGGTGCGGATCCCGGA TGTGGTGGTGCTGCCTTTGGAGCAGTGGCAGGAGATGGGATCCCGAGAGGCTTTGATTCGCTTGGAGGATCCGCCGCCGC TATTGGTGGTGGAGGTGGTGAGCGAATCCAGCCGGGCGGCGGACTACCGGGCCAAACGGGCGGAATACTGCGTTTTGGGC ATCGGCGAGTATTGGATTGTGGATCCTTTGGAAGAGAAGGTGAGCCTGCTGCTGTTGCACGAGGGCTGGTACGACCTGCT GGAGCTGAAGGGATCCGAGGGGGTACCTTCGCAGGTTTTTGTGGGGCTAGAGTTGCAGGTGGGGGAGATCTTGGCTGCCG ATTCAGGTTATCCTGGTAGAGCTACGGGGAGTTAG
Upstream 100 bases:
>100_bases GGATCTGCGCCGCGATTTTTTGGAACGGCGGTAGCAGCCTCAAGTGCTCCGCGCCGGCCCTCACCCCCAGCCCCTCTCCC TGAGGGAGAGGGGGGTTAGG
Downstream 100 bases:
>100_bases CTCAGTTGGTAGAGCGCTGCGATCGCACCGCAGAGGTCAGGGATTCGAGTTCCCTACTCTCCATCGCCCTCACCCCTGGC CCCTCTCCCAGCAGGAGAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 224; Mature: 223
Protein sequence:
>224_residues MAAEQPLEVAVALTIGSVSASGSTTARLSLAEYLKYSDGGDTRYELVAGELVPMALPTGRHVQIQKFLSQVFEAEIARRQ LPWTTIQGGLGIQSPRGNRWETVRIPDVVVLPLEQWQEMGSREALIRLEDPPPLLVVEVVSESSRAADYRAKRAEYCVLG IGEYWIVDPLEEKVSLLLLHEGWYDLLELKGSEGVPSQVFVGLELQVGEILAADSGYPGRATGS
Sequences:
>Translated_224_residues MAAEQPLEVAVALTIGSVSASGSTTARLSLAEYLKYSDGGDTRYELVAGELVPMALPTGRHVQIQKFLSQVFEAEIARRQ LPWTTIQGGLGIQSPRGNRWETVRIPDVVVLPLEQWQEMGSREALIRLEDPPPLLVVEVVSESSRAADYRAKRAEYCVLG IGEYWIVDPLEEKVSLLLLHEGWYDLLELKGSEGVPSQVFVGLELQVGEILAADSGYPGRATGS >Mature_223_residues AAEQPLEVAVALTIGSVSASGSTTARLSLAEYLKYSDGGDTRYELVAGELVPMALPTGRHVQIQKFLSQVFEAEIARRQL PWTTIQGGLGIQSPRGNRWETVRIPDVVVLPLEQWQEMGSREALIRLEDPPPLLVVEVVSESSRAADYRAKRAEYCVLGI GEYWIVDPLEEKVSLLLLHEGWYDLLELKGSEGVPSQVFVGLELQVGEILAADSGYPGRATGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24504; Mature: 24373
Theoretical pI: Translated: 4.38; Mature: 4.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAEQPLEVAVALTIGSVSASGSTTARLSLAEYLKYSDGGDTRYELVAGELVPMALPTGR CCCCCCEEEEEEEEEECCCCCCCCCEEHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCC HVQIQKFLSQVFEAEIARRQLPWTTIQGGLGIQSPRGNRWETVRIPDVVVLPLEQWQEMG CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCEEEECCHHHHCCC SREALIRLEDPPPLLVVEVVSESSRAADYRAKRAEYCVLGIGEYWIVDPLEEKVSLLLLH CCEEEEEECCCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCEEEECCHHHCEEEEEEE EGWYDLLELKGSEGVPSQVFVGLELQVGEILAADSGYPGRATGS CCCHHHHEECCCCCCCCEEEEEEEEEECEEEECCCCCCCCCCCC >Mature Secondary Structure AAEQPLEVAVALTIGSVSASGSTTARLSLAEYLKYSDGGDTRYELVAGELVPMALPTGR CCCCCEEEEEEEEEECCCCCCCCCEEHHHHHHHHCCCCCCCEEEEEECCEEEEECCCCC HVQIQKFLSQVFEAEIARRQLPWTTIQGGLGIQSPRGNRWETVRIPDVVVLPLEQWQEMG CCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCEEEEECCCEEEECCHHHHCCC SREALIRLEDPPPLLVVEVVSESSRAADYRAKRAEYCVLGIGEYWIVDPLEEKVSLLLLH CCEEEEEECCCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCEEEECCHHHCEEEEEEE EGWYDLLELKGSEGVPSQVFVGLELQVGEILAADSGYPGRATGS CCCHHHHEECCCCCCCCEEEEEEEEEECEEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA