| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606090
Identifier: 86606090
GI number: 86606090
Start: 1430023
End: 1430361
Strand: Reverse
Name: 86606090
Synonym: CYA_1421
Alternate gene names: NA
Gene position: 1430361-1430023 (Counterclockwise)
Preceding gene: 86606091
Following gene: 86606089
Centisome position: 48.77
GC content: 58.41
Gene sequence:
>339_bases ATGACGCCCGAGCAAGAACAGTGGCTGATTCAAGCCATCCAAGAGTTGCAAGCCTCCCAAAGAGAGCTGCAAGCCTCCCA AAAAGAATTGCAAGCTGCCCAGCAGGAGCTGCGTCTTGTCCAGCAAAACCAGCAGGTTTTGATCCAAGAGCTGCGGGAGG GACAGGCGATGCTGGCACAGTTTTTCCGCGAGGCACTGGATCGCTTTGACGAGCGCACCCGAGCCATTGAACGGCGCACG GAAGCCCTGGAACGGCGCACTGACGAGATGGCCCGAGAGATGCGGGAGATGCGGCAAGAGATTCGGGATCTGCGCCGCGA CTTTTTGGAACGGCGGTAA
Upstream 100 bases:
>100_bases GGGATTCGAGTTCCCTACTCTCCATCGCCCTCACCCCTGGCCCCTCTCCCAGCAGGAGAGGGGTGGTAGGATTTCCTTAT TCTGTAGTGTTTCAGTAACC
Downstream 100 bases:
>100_bases CTTGGGCCCAAGCGCTCTGCGTTGCTAGTGTAACCATCCCCGGATCCTTCTCCCAGGAGGAGATTTAGGGTGGTAGGATT TCCTTGTTCTGTAGCGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MTPEQEQWLIQAIQELQASQRELQASQKELQAAQQELRLVQQNQQVLIQELREGQAMLAQFFREALDRFDERTRAIERRT EALERRTDEMAREMREMRQEIRDLRRDFLERR
Sequences:
>Translated_112_residues MTPEQEQWLIQAIQELQASQRELQASQKELQAAQQELRLVQQNQQVLIQELREGQAMLAQFFREALDRFDERTRAIERRT EALERRTDEMAREMREMRQEIRDLRRDFLERR >Mature_111_residues TPEQEQWLIQAIQELQASQRELQASQKELQAAQQELRLVQQNQQVLIQELREGQAMLAQFFREALDRFDERTRAIERRTE ALERRTDEMAREMREMRQEIRDLRRDFLERR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13743; Mature: 13612
Theoretical pI: Translated: 4.89; Mature: 4.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPEQEQWLIQAIQELQASQRELQASQKELQAAQQELRLVQQNQQVLIQELREGQAMLAQ CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFREALDRFDERTRAIERRTEALERRTDEMAREMREMRQEIRDLRRDFLERR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TPEQEQWLIQAIQELQASQRELQASQKELQAAQQELRLVQQNQQVLIQELREGQAMLAQ CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFREALDRFDERTRAIERRTEALERRTDEMAREMREMRQEIRDLRRDFLERR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA