| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
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The map label for this gene is 86606072
Identifier: 86606072
GI number: 86606072
Start: 1407996
End: 1408382
Strand: Reverse
Name: 86606072
Synonym: CYA_1402
Alternate gene names: NA
Gene position: 1408382-1407996 (Counterclockwise)
Preceding gene: 86606075
Following gene: 86606068
Centisome position: 48.02
GC content: 61.5
Gene sequence:
>387_bases GTGCAAGGGAAGAGGCGGCGGTTTTTCTGCTGCGGCCCAGCTCAGTCCCAACCCAATCCGAGCCAGACCATGACGGGATC CGACTTTCAAGCTTTGCTGCGGGAGAAGTGGGGCTATTCCTACGACGTGCAACTGCGCCGCATGGGGGGCAGGGTGGTTC TGTTGGTGATGTGGCGCTACCTGGAGCAGCCCTCTTTCCCCTTGAGCGAGGCCGAGTATCTGGCTCGCCTGGAGTCTGTC ATGGCCCATTTGCAGGCGTGGGGCGTGTGGGAAGCGGTGCAGCGAGAAATTGAGGCTACCCGTCAGAAACCCCGCATAGG CAAGGCGGTGGCCATTCCTTTGAATTTGCAAGGGGTGGGAGAGCGCGCCTCCGAGTGGCTGCTGTAG
Upstream 100 bases:
>100_bases GCCAGTACAAACCTGAGAAGTTTTAATGTTCGTTGACAAATGACATCATCCTAACCGAGCTCCTTGGCTAATATCATTAA GAAATGCAAAGCTAAAGGAA
Downstream 100 bases:
>100_bases TCTTCCTCGCCCCCGGCTCTTCCCTGAAGGGGAGTTTGCAATTGCAGCAACCGACAGGTTCGTCCCTATGACGAAAACTC CAGACCTCAGCCGGCCTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MQGKRRRFFCCGPAQSQPNPSQTMTGSDFQALLREKWGYSYDVQLRRMGGRVVLLVMWRYLEQPSFPLSEAEYLARLESV MAHLQAWGVWEAVQREIEATRQKPRIGKAVAIPLNLQGVGERASEWLL
Sequences:
>Translated_128_residues MQGKRRRFFCCGPAQSQPNPSQTMTGSDFQALLREKWGYSYDVQLRRMGGRVVLLVMWRYLEQPSFPLSEAEYLARLESV MAHLQAWGVWEAVQREIEATRQKPRIGKAVAIPLNLQGVGERASEWLL >Mature_128_residues MQGKRRRFFCCGPAQSQPNPSQTMTGSDFQALLREKWGYSYDVQLRRMGGRVVLLVMWRYLEQPSFPLSEAEYLARLESV MAHLQAWGVWEAVQREIEATRQKPRIGKAVAIPLNLQGVGERASEWLL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14740; Mature: 14740
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQGKRRRFFCCGPAQSQPNPSQTMTGSDFQALLREKWGYSYDVQLRRMGGRVVLLVMWRY CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHH LEQPSFPLSEAEYLARLESVMAHLQAWGVWEAVQREIEATRQKPRIGKAVAIPLNLQGVG HCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC ERASEWLL HHHHHCCC >Mature Secondary Structure MQGKRRRFFCCGPAQSQPNPSQTMTGSDFQALLREKWGYSYDVQLRRMGGRVVLLVMWRY CCCCCCEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCHHHHHCCCHHHHHHHHHH LEQPSFPLSEAEYLARLESVMAHLQAWGVWEAVQREIEATRQKPRIGKAVAIPLNLQGVG HCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCC ERASEWLL HHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA