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The map label for this gene is recR

Identifier: 86606039

GI number: 86606039

Start: 1379706

End: 1380305

Strand: Reverse

Name: recR

Synonym: CYA_1368

Alternate gene names: 86606039

Gene position: 1380305-1379706 (Counterclockwise)

Preceding gene: 86606040

Following gene: 86606038

Centisome position: 47.06

GC content: 62.83

Gene sequence:

>600_bases
ATGTACACTCGCCCTTTGGCTCGCCTGATCGAGGAGCTGCAGCGCCTGCCCGGCATTGGCTCCAAAACAGCTCAGCGCCT
GGCCTTGCACTTGCTCAACCGGCCTGCTGGCGAGGTCGAGGCCCTGGCCAAAGCCCTGCTGGAGGCTAAGCAAACCGTTA
AGCATTGCTCCATCTGTTTTAACTGGTCGGCGGAGGATCCCTGCGAGATCTGTCGCTCGCCGCAGAGGGATCCGTCGACC
TGGTGCGTAGTGGCCGATGTCAAGGATCTCATCGCCATGGAGCGCACCCGCGAGTTCAAGGGCCTTTACCACGTTTTGGG
GGGTCTGATCTCGCCCATGAACGGGATCGGGGCCGAGCAGTTGCGCATCCGCGAGCTGGTGGCCCGGGTGGCGCGGGAGA
AGCCCCAAGAGCTGATCTTCGCCCTCAGCCCTAGCGTGGAGGGGGAGGTCACTATGCACGTGGTTAAAGATTACCTGAAG
CCGGTTGCCCCCGGCCTGCGCATGACCCGTCTGGCCTTTGGCCTGCCCATGGGATCCGAGTTGGAGTATGCCGACGAGGT
TACCCTGGCCCGTGCCCTAGAAGCGCGGCAGGAGTTTTAG

Upstream 100 bases:

>100_bases
TCAGTCCGCCGAGACGATGCGCAAGCGCATGGAGGAGCTGACCGGAAACATCAGCCTGCCGGGGTTGGGGTTGGGCTGAT
CCCGGCCAGCCTGGCTTCCT

Downstream 100 bases:

>100_bases
GCCCAGGTAACTGCGGGCTGGGCTTGCCCAGAGCAAGGTGTCCAACCCTGAAGTTGTTGCTAAGGTGAGGACCACGGGTC
TTGTCATGGGATCCCGGCAC

Product: recombination protein RecR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICFNWSAEDPCEICRSPQRDPST
WCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQLRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLK
PVAPGLRMTRLAFGLPMGSELEYADEVTLARALEARQEF

Sequences:

>Translated_199_residues
MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICFNWSAEDPCEICRSPQRDPST
WCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQLRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLK
PVAPGLRMTRLAFGLPMGSELEYADEVTLARALEARQEF
>Mature_199_residues
MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICFNWSAEDPCEICRSPQRDPST
WCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQLRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLK
PVAPGLRMTRLAFGLPMGSELEYADEVTLARALEARQEF

Specific function: May play a role in DNA repair. It seems to be involved in an recBC-independent recombinational process of DNA repair. It may act with recF and recO

COG id: COG0353

COG function: function code L; Recombinational DNA repair protein (RecF pathway)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Toprim domain

Homologues:

Organism=Escherichia coli, GI1786678, Length=201, Percent_Identity=38.3084577114428, Blast_Score=138, Evalue=3e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RECR_SYNJA (Q2JUS3)

Other databases:

- EMBL:   CP000239
- RefSeq:   YP_474802.1
- ProteinModelPortal:   Q2JUS3
- SMR:   Q2JUS3
- STRING:   Q2JUS3
- GeneID:   3899669
- GenomeReviews:   CP000239_GR
- KEGG:   cya:CYA_1368
- TIGR:   CYA_1368
- eggNOG:   COG0353
- HOGENOM:   HBG571744
- OMA:   HGAISPM
- ProtClustDB:   PRK00076
- BioCyc:   SSP321327:CYA_1368-MONOMER
- HAMAP:   MF_00017
- InterPro:   IPR003583
- InterPro:   IPR000093
- InterPro:   IPR006171
- InterPro:   IPR015967
- SMART:   SM00278
- SMART:   SM00493
- TIGRFAMs:   TIGR00615

Pfam domain/function: PF02132 RecR; PF01751 Toprim; SSF111304 RecR

EC number: NA

Molecular weight: Translated: 22235; Mature: 22235

Theoretical pI: Translated: 7.41; Mature: 7.41

Prosite motif: PS01300 RECR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
NWSAEDPCEICRSPQRDPSTWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQ
CCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLKPVAPGLRMTRLAFGLPMGSE
HHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
LEYADEVTLARALEARQEF
CCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYTRPLARLIEELQRLPGIGSKTAQRLALHLLNRPAGEVEALAKALLEAKQTVKHCSICF
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHC
NWSAEDPCEICRSPQRDPSTWCVVADVKDLIAMERTREFKGLYHVLGGLISPMNGIGAEQ
CCCCCCHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LRIRELVARVAREKPQELIFALSPSVEGEVTMHVVKDYLKPVAPGLRMTRLAFGLPMGSE
HHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCC
LEYADEVTLARALEARQEF
CCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA