Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606038

Identifier: 86606038

GI number: 86606038

Start: 1379067

End: 1379558

Strand: Reverse

Name: 86606038

Synonym: CYA_1367

Alternate gene names: NA

Gene position: 1379558-1379067 (Counterclockwise)

Preceding gene: 86606039

Following gene: 86606033

Centisome position: 47.04

GC content: 60.77

Gene sequence:

>492_bases
ATGGCGGATACGGCACAAACTCACCTCAGCTCAGGCACCGTCCAGGGGCTGGACTATGTAGTTCTGGGAGTGGCCTCTTG
CTTCCAACGGGATGAGGACGGTCGCCTCAGGGAGGTGTTGGTGGCCGAGCCGGTTCCCGCCGCCGCCCTGGATTGCCTGG
CCCAAGAGCGCCGCAGCACTTCCTACTGCCTTCTCTACGCCACTACTTACGCAGAAGTTGTCGACAACGGGATCCCGACT
TTGCCCGCCGATGTTTTCCCGCCAGGGGTGGTGCTGGGAGAAGATTTTGTGGAGCGGCTACAAGCGGCGGCCCGTACGTA
CCGCAGCAAGCCCCAATTTCGTCACATCCCTCTGCACCAGGTCTGCACGCCAGAGAGGGGGGTGTTCAAGCTCCATTTCA
GCGCTGAGCCGCGGCGGATTCTCAATGCGGCAATGGAAGTGAGGGATGCCGACAACATCAAGCAGCACCCCCACACCCAT
CAGCATTTCTAA

Upstream 100 bases:

>100_bases
CTGAAGTTGTTGCTAAGGTGAGGACCACGGGTCTTGTCATGGGATCCCGGCACTTACCTGAGGTCAAGAAAGTTCAACCA
GCAACGCGGAGAGGGCAGCG

Downstream 100 bases:

>100_bases
GCCCGCTAGCAGCTATCGCTACCACATCCCTGTTGCCGAAACTAGGCAAATACATCGAGTCCCACCTCAGGGCCTACCCT
TGGAAGAGCAGTTTACAGTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 162

Protein sequence:

>163_residues
MADTAQTHLSSGTVQGLDYVVLGVASCFQRDEDGRLREVLVAEPVPAAALDCLAQERRSTSYCLLYATTYAEVVDNGIPT
LPADVFPPGVVLGEDFVERLQAAARTYRSKPQFRHIPLHQVCTPERGVFKLHFSAEPRRILNAAMEVRDADNIKQHPHTH
QHF

Sequences:

>Translated_163_residues
MADTAQTHLSSGTVQGLDYVVLGVASCFQRDEDGRLREVLVAEPVPAAALDCLAQERRSTSYCLLYATTYAEVVDNGIPT
LPADVFPPGVVLGEDFVERLQAAARTYRSKPQFRHIPLHQVCTPERGVFKLHFSAEPRRILNAAMEVRDADNIKQHPHTH
QHF
>Mature_162_residues
ADTAQTHLSSGTVQGLDYVVLGVASCFQRDEDGRLREVLVAEPVPAAALDCLAQERRSTSYCLLYATTYAEVVDNGIPTL
PADVFPPGVVLGEDFVERLQAAARTYRSKPQFRHIPLHQVCTPERGVFKLHFSAEPRRILNAAMEVRDADNIKQHPHTHQ
HF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18150; Mature: 18019

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADTAQTHLSSGTVQGLDYVVLGVASCFQRDEDGRLREVLVAEPVPAAALDCLAQERRST
CCCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCC
SYCLLYATTYAEVVDNGIPTLPADVFPPGVVLGEDFVERLQAAARTYRSKPQFRHIPLHQ
CEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHH
VCTPERGVFKLHFSAEPRRILNAAMEVRDADNIKQHPHTHQHF
HCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCC
>Mature Secondary Structure 
ADTAQTHLSSGTVQGLDYVVLGVASCFQRDEDGRLREVLVAEPVPAAALDCLAQERRST
CCCHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCC
SYCLLYATTYAEVVDNGIPTLPADVFPPGVVLGEDFVERLQAAARTYRSKPQFRHIPLHQ
CEEEEEHHHHHHHHHCCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCCHHH
VCTPERGVFKLHFSAEPRRILNAAMEVRDADNIKQHPHTHQHF
HCCCCCCEEEEEECCCHHHHHHHHHHHHCCHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA