| Definition | Synechococcus sp. JA-3-3Ab, complete genome. |
|---|---|
| Accession | NC_007775 |
| Length | 2,932,766 |
Click here to switch to the map view.
The map label for this gene is 86606027
Identifier: 86606027
GI number: 86606027
Start: 1366455
End: 1366745
Strand: Reverse
Name: 86606027
Synonym: CYA_1355
Alternate gene names: NA
Gene position: 1366745-1366455 (Counterclockwise)
Preceding gene: 86606028
Following gene: 86606026
Centisome position: 46.6
GC content: 56.36
Gene sequence:
>291_bases GTGCGGGGCTACCAAGCTATCCTTTTGTTGTGTAGCGTCGATGCTTGTGGGGTCATGTCTGAAGCTCAAGATTTGCTGCC GGTGGGGGCGAGGGTTGAGGTGGTAGAGATGCCTCCTTACTTGAAAACGGCTGACCCGATGCCGATGTTGCGCCCCGCCC ATTTGATTCGGCTGCACGAACAAGGGGTGATCTTGCAGCGGCGGCTGTTGGGCACCTACAGTGTGCAGTTTGCCAATGGC ATCTTTTTAATTGACGGCAAGTACCTGGCTCTTGTGGGATCCCGCCCGTGA
Upstream 100 bases:
>100_bases AAGTCAGGGACAGGTTGTTTGAGCTATGAAACTATATCAACGACCCCCATCATGGGTAAGCGACCAAAGTCGCTAGCGGG CTTTTCCGCCCCGCACTCAA
Downstream 100 bases:
>100_bases GCGCCCCATCTCCGCCGGAGCTCAGGAGACTGGGACTTTTGCTCTTTGGGAGCTGCGGGTCTTGCGCGTGCCGGCGGACT TTCGCGGTAGATTAAAGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 96; Mature: 96
Protein sequence:
>96_residues MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHEQGVILQRRLLGTYSVQFANG IFLIDGKYLALVGSRP
Sequences:
>Translated_96_residues MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHEQGVILQRRLLGTYSVQFANG IFLIDGKYLALVGSRP >Mature_96_residues MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHEQGVILQRRLLGTYSVQFANG IFLIDGKYLALVGSRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10594; Mature: 10594
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 7.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 5.2 %Met (Mature Protein) 7.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHE CCCHHEEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECC QGVILQRRLLGTYSVQFANGIFLIDGKYLALVGSRP CCCEEHHHHHHHEEEEECCCEEEECCCEEEEEECCC >Mature Secondary Structure MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHE CCCHHEEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECC QGVILQRRLLGTYSVQFANGIFLIDGKYLALVGSRP CCCEEHHHHHHHEEEEECCCEEEECCCEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA