Definition Synechococcus sp. JA-3-3Ab, complete genome.
Accession NC_007775
Length 2,932,766

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The map label for this gene is 86606027

Identifier: 86606027

GI number: 86606027

Start: 1366455

End: 1366745

Strand: Reverse

Name: 86606027

Synonym: CYA_1355

Alternate gene names: NA

Gene position: 1366745-1366455 (Counterclockwise)

Preceding gene: 86606028

Following gene: 86606026

Centisome position: 46.6

GC content: 56.36

Gene sequence:

>291_bases
GTGCGGGGCTACCAAGCTATCCTTTTGTTGTGTAGCGTCGATGCTTGTGGGGTCATGTCTGAAGCTCAAGATTTGCTGCC
GGTGGGGGCGAGGGTTGAGGTGGTAGAGATGCCTCCTTACTTGAAAACGGCTGACCCGATGCCGATGTTGCGCCCCGCCC
ATTTGATTCGGCTGCACGAACAAGGGGTGATCTTGCAGCGGCGGCTGTTGGGCACCTACAGTGTGCAGTTTGCCAATGGC
ATCTTTTTAATTGACGGCAAGTACCTGGCTCTTGTGGGATCCCGCCCGTGA

Upstream 100 bases:

>100_bases
AAGTCAGGGACAGGTTGTTTGAGCTATGAAACTATATCAACGACCCCCATCATGGGTAAGCGACCAAAGTCGCTAGCGGG
CTTTTCCGCCCCGCACTCAA

Downstream 100 bases:

>100_bases
GCGCCCCATCTCCGCCGGAGCTCAGGAGACTGGGACTTTTGCTCTTTGGGAGCTGCGGGTCTTGCGCGTGCCGGCGGACT
TTCGCGGTAGATTAAAGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 96; Mature: 96

Protein sequence:

>96_residues
MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHEQGVILQRRLLGTYSVQFANG
IFLIDGKYLALVGSRP

Sequences:

>Translated_96_residues
MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHEQGVILQRRLLGTYSVQFANG
IFLIDGKYLALVGSRP
>Mature_96_residues
MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHEQGVILQRRLLGTYSVQFANG
IFLIDGKYLALVGSRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10594; Mature: 10594

Theoretical pI: Translated: 8.22; Mature: 8.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHE
CCCHHEEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECC
QGVILQRRLLGTYSVQFANGIFLIDGKYLALVGSRP
CCCEEHHHHHHHEEEEECCCEEEECCCEEEEEECCC
>Mature Secondary Structure
MRGYQAILLLCSVDACGVMSEAQDLLPVGARVEVVEMPPYLKTADPMPMLRPAHLIRLHE
CCCHHEEEEEECCCCCCCHHHHHHCCCCCCEEEEEECCCCCCCCCCCCCCCCCEEEEECC
QGVILQRRLLGTYSVQFANGIFLIDGKYLALVGSRP
CCCEEHHHHHHHEEEEECCCEEEECCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA